Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  216 bits (549), Expect = 2e-60
 Identities = 134/355 (37%), Positives = 202/355 (56%), Gaps = 10/355 (2%)

Query: 89  LLLIVVFVVLLLFAARVML-----RQTQYLSDVIKLM-----AQRNLSEPIKMDCKDEYG 138
           L  ++V  +L+ FA  + +     R T+ L D++ ++      + +L++ + +D ++E G
Sbjct: 355 LAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELG 414

Query: 139 DVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMS 198
            +A        +LQ +I   + + Q+++  +E        T    Q +  EI+ +ATA+ 
Sbjct: 415 QIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVH 474

Query: 199 EMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEE 258
           EM++T Q VA +A  A+    NA + A  G+  V+ T + ++EL+ +I  +   V  +  
Sbjct: 475 EMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLAR 534

Query: 259 RVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVE 318
               I +++ TIRSI+EQTNLLALNAAIEAARAGE GRGFAVVADEVRNLAQ+TQ AT E
Sbjct: 535 DSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGE 594

Query: 319 IQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAA 378
           IQ+MI QLQ      V +ME+S  +    VE    A   L  I   V L+NDMN QIA+A
Sbjct: 595 IQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASA 654

Query: 379 AGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           A +QS VAE++N N+ N+ ++ +       E  + S  +   AE+  R I  FRV
Sbjct: 655 AEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709