Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  214 bits (544), Expect = 6e-60
 Identities = 140/375 (37%), Positives = 208/375 (55%), Gaps = 8/375 (2%)

Query: 62  SLLAATNSV-EVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLM 120
           ++LA T SV +V  QH+ +Y   V    L L+    +L+ F    +L     L DV+ L 
Sbjct: 120 AVLARTPSVMQVLGQHFFSYATAVAVLMLGLLAASQLLIRF----LLSHLNTLKDVM-LH 174

Query: 121 AQRN--LSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSE 178
            +R+  L   + +D +DE G +A      +   Q ++     A+  L      +  SM++
Sbjct: 175 VERSGDLQARVPLDSRDEVGQMASAFNAMQGGYQRVVSTVAQAAARLDEGASRLATSMND 234

Query: 179 TKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISK 238
                + +  E DQ ATA++EMS+TV  +AEHA+     ++NA + A  G + V      
Sbjct: 235 VHKGMRGQQGETDQAATAINEMSATVHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKS 294

Query: 239 MSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGF 298
           +S LS+ +  + + + Q+      I+ VV  I SI+EQTNLLALNAAIEAARAGE GRGF
Sbjct: 295 ISSLSQGVQQTGEMIEQLAADSQRINGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGF 354

Query: 299 AVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSEL 358
           AVVADEVRNLA+R Q++T EI +MIS LQS    AV  M++S ++A D V    +A   L
Sbjct: 355 AVVADEVRNLAKRVQDSTDEITQMISGLQSMTRDAVEFMQESSLKADDCVREAHDAAQAL 414

Query: 359 DGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQ 418
           + I + V  + + N QIA AA QQS VAEE+N ++  +R++ E +V        TS  + 
Sbjct: 415 EAIADAVAQMRESNTQIAVAAEQQSQVAEELNRSVTGIRDVTERTVEQTVSSASTSAELA 474

Query: 419 SNAEELDRKITAFRV 433
           + + +L R I   R+
Sbjct: 475 ALSADLSRAIGQLRL 489