Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  225 bits (574), Expect = 2e-63
 Identities = 130/356 (36%), Positives = 208/356 (58%), Gaps = 1/356 (0%)

Query: 79  NYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQ-RNLSEPIKMDCKDEY 137
           N ++    Q LLL++  VV+ +    V++R+   +   +  MA+  +LS  + +  KDE 
Sbjct: 184 NIMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEI 243

Query: 138 GDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAM 197
           G +     +   + +  ++     + +LT ++E ++    +T  +  E+ +E D +A+AM
Sbjct: 244 GAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAM 303

Query: 198 SEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVE 257
           +EMS+TVQ VA +A   ++ +  A  +++ G +     +  +  L  +I  +AQ + +VE
Sbjct: 304 NEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVE 363

Query: 258 ERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATV 317
               +I  V+G I  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +T 
Sbjct: 364 SDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTE 423

Query: 318 EIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAA 377
           EIQ MI QLQS   +AV  M+++ ++A  G + +  A   L  I  +V  +N+MN QIA 
Sbjct: 424 EIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIAT 483

Query: 378 AAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           AA QQS VAEE+N N++ +  + + + T  T+  E S+ +   A EL+R +  F++
Sbjct: 484 AAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539