Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  207 bits (526), Expect = 8e-58
 Identities = 124/345 (35%), Positives = 199/345 (57%), Gaps = 8/345 (2%)

Query: 89  LLLIVVFVVLLLFAA----RVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVAREL 144
           L++I+  VV+ LF+     R ++   + L + I  ++Q   ++ +     DE G +A   
Sbjct: 192 LIMILASVVVALFSLWLVNRRIIEPIRSLIEHIARLSQGKFADRVDASRADELGRLAVAA 251

Query: 145 EKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTV 204
              R  L D       ++  L S +  ++       D  +E+F+  DQ+ATAM EMS+T 
Sbjct: 252 NVLRDFLADTFTRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAMHEMSATA 311

Query: 205 QTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAIS 264
           Q V+ HA  A+   + A   AQ G+  +++TI+ ++++S +I+S+A+ + ++E     I 
Sbjct: 312 QEVSRHAAEAAQAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLEGDSGRIG 371

Query: 265 SVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMIS 324
            V+  IR I++QTNLLALNAAIEAARAG+AGRGFAVVADEVR LAQRT  +T EI ++I 
Sbjct: 372 KVLEVIRGIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAEIHQIID 431

Query: 325 QLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSN 384
            +Q+ A++AV  +E    ++  GV  +T AG  L  I   V+ + DMN QIA AA +Q+ 
Sbjct: 432 TVQTGASNAVRAIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQTA 491

Query: 385 VAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKIT 429
           VAE+++ N+  +  +     T+  + +E +E    N   L  ++T
Sbjct: 492 VAEDISRNITEITSI----ATINQQNVERTETASQNLHGLSAQLT 532