Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  203 bits (517), Expect = 9e-57
 Identities = 126/364 (34%), Positives = 204/364 (56%), Gaps = 6/364 (1%)

Query: 71  EVAQQHYD---NYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSE 127
           E A   YD   N ++ +     LL +VF  +L+ +    +      ++ I   AQ NL+ 
Sbjct: 179 EQASIEYDSAFNMVIGLLIAATLLTLVFAWMLIKSITTPIATALLAAETI---AQGNLTR 235

Query: 128 PIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEF 187
           PI +D  DE G +   ++  + +L+D ++    ++ +L S  E +     E+     ++ 
Sbjct: 236 PISIDGTDEAGRLLLAMKTMQDKLRDTLQGISGSATQLASAAEELNAVTDESARGLVQQN 295

Query: 188 NEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDIS 247
           +EI+Q ATA+++M+S V+ VA +A + S  + +A+  A  G+  V+ T+S +  +S D+ 
Sbjct: 296 DEIEQAATAVNQMTSAVEEVARNATSTSQASRSAATSAGDGRDLVQETVSAIERMSGDVQ 355

Query: 248 SSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRN 307
            +A+ +  +      I  V+  IR +++QTNLLALNAAIEAARAGEAGRGFAVVADEVR 
Sbjct: 356 GTAELIISLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRA 415

Query: 308 LAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQL 367
           LA RTQ +T EI+ MIS +Q+    AV+ M  S  +A   + +   AG  L+ I + V+ 
Sbjct: 416 LAHRTQQSTSEIERMISSIQTGTEQAVSSMRNSTERAESTLNIAKGAGQALNTINSAVEE 475

Query: 368 LNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRK 427
           +N+ N  IA+AA +Q+ VA E++ NL N+R+L   S     +    S  +   A +L+  
Sbjct: 476 INERNMVIASAAEEQAQVAREVDRNLVNIRDLSAQSTNGANQTSAASTELSRLAIDLNGM 535

Query: 428 ITAF 431
           +  F
Sbjct: 536 VARF 539