Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  198 bits (504), Expect = 3e-55
 Identities = 125/355 (35%), Positives = 197/355 (55%), Gaps = 4/355 (1%)

Query: 83  QVFWQTLLLIVVFVVLLLFAARVMLRQ-TQYLSDVIKL---MAQRNLSEPIKMDCKDEYG 138
           Q  W   + I V V+  L  A +  R  T  + D + +   +A  +LS+ I     DE  
Sbjct: 188 QTLWMVGIFITVGVITTLLLAWMYTRSLTGPIGDSLSIAQRIATNDLSQDIPQHGTDEAA 247

Query: 139 DVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMS 198
            +   L   +  L++ + L  D+S +L + +E M     +   +   + NEI+  ATA++
Sbjct: 248 KLIAALATMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDASRTILRQTNEIEMAATAVN 307

Query: 199 EMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEE 258
           EMS+ V+ VA +A +AS +T  +S  A  G+  V  T++ ++ +   +  ++  V  +  
Sbjct: 308 EMSAAVEEVASNAASASEVTSQSSTAAMAGRAQVDETVTAINLMVSKVQITSTEVQGLAV 367

Query: 259 RVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVE 318
               IS V+  IR+I+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ +T E
Sbjct: 368 MATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTRE 427

Query: 319 IQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAA 378
           I++M+  +Q+   +AV+ ME++ VQA   +E+   AG  L  I   +  +N+ N  IA A
Sbjct: 428 IEQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQINERNLMIATA 487

Query: 379 AGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           A +Q+ VA E++ +L ++R+L   +     +    +  + + A  L+R    FRV
Sbjct: 488 AEEQAQVAREVDRSLVSIRDLSSQTSEGSNQTAIATAELSTLASSLNRLTKQFRV 542