Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (501), Expect = 7e-55
 Identities = 125/384 (32%), Positives = 212/384 (55%), Gaps = 2/384 (0%)

Query: 50  GKQLWDADIFYQSLLAATNSVEVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQ 109
           GKQL D   FY + + A      AQ      +V +F   ++  +  + L L+  R ++  
Sbjct: 160 GKQLGDLADFYLTQVDAEGKSAGAQYDKSRDIVIIF--VVIAALCTIGLALWLTRSIVGP 217

Query: 110 TQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLT 169
            Q      + +A  +L+  I++D +DE   + R L   +  L++ ++    ++ +L S  
Sbjct: 218 LQRAVTAAEQVANGDLTHTIEVDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAA 277

Query: 170 EVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQ 229
             +     ++     ++  EIDQ ATA++EM+S V+ VA +A + S  +  +S  A  GQ
Sbjct: 278 TELNSVTEDSYRGLNQQNAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQ 337

Query: 230 QFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAA 289
             V  T+  +  L+ ++ +++  V  +  +   I  V+  IRSI+EQTNLLALNAAIEAA
Sbjct: 338 TRVIETVQSIQTLTDNVQATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAA 397

Query: 290 RAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVE 349
           RAGE+GRGFAVVADEVR LA RTQ +T+EI  M+S ++S +  A++ M  S  +A   + 
Sbjct: 398 RAGESGRGFAVVADEVRALAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLA 457

Query: 350 LITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTE 409
           L   AG  L  I + +  +++ N  IA+AA +Q+ V+ E++ N+ N+R+L   S     +
Sbjct: 458 LAKGAGESLSEITSSINQISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQ 517

Query: 410 LLETSEIMQSNAEELDRKITAFRV 433
           +  +S  +   A +L++ ++ F+V
Sbjct: 518 ISASSHELSRLAADLNQVVSRFKV 541