Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (541), Expect = 2e-59
 Identities = 125/324 (38%), Positives = 191/324 (58%), Gaps = 3/324 (0%)

Query: 113 LSDVIKL---MAQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLT 169
           L D +KL   +A  +L+    +  KDE G +   + +    L++LI    D   ++ S  
Sbjct: 296 LRDTLKLAERVADGDLTHNQVVTRKDELGQLQGSMMRMTGNLRELIGGLRDGVTQIASAA 355

Query: 170 EVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQ 229
           E ++    +T      + NE DQ+ATAM EMS+TVQ VA +A+ AS    NAS++A+ G 
Sbjct: 356 EQLSAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNAEQASHAAVNASKEAREGD 415

Query: 230 QFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAA 289
             V   ++++ +L+ +++ S  A++ ++     I  V+  I++++EQTNLLALNAAIEAA
Sbjct: 416 GVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIKAVAEQTNLLALNAAIEAA 475

Query: 290 RAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVE 349
           RAGEAGRGFAVVADEVR+LAQRTQ +T EI  +IS L +       +++ S    A+ VE
Sbjct: 476 RAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTAQVATILDNSQALTANSVE 535

Query: 350 LITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTE 409
           L  NAG  ++ +   +  +  MN QIAAAA +QS VAEE+N ++ NVR++ E + +   E
Sbjct: 536 LTRNAGVSINNMTQAISTIETMNHQIAAAAEEQSAVAEEINRSVLNVRDISEQTASASEE 595

Query: 410 LLETSEIMQSNAEELDRKITAFRV 433
              +S  +      L   ++ FRV
Sbjct: 596 TAASSVELARLGVHLQSLVSRFRV 619