Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  202 bits (514), Expect = 2e-56
 Identities = 129/367 (35%), Positives = 206/367 (56%), Gaps = 12/367 (3%)

Query: 73  AQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQT------QYLSDVIKLMAQRNLS 126
           A Q YD+ L  V       +++FV LL      +L +T        LS V + +A  +L+
Sbjct: 179 ATQVYDSGLYIVIG-----LIIFVALLTLCLATLLTKTITSPIGSALS-VAERIASSDLT 232

Query: 127 EPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEE 186
           + +++   DE G +   L   ++ L+  I    D+S +L + +E MT    ++      +
Sbjct: 233 KEVEVSGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQ 292

Query: 187 FNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDI 246
            +E++Q ATA++EMS+ V  VA +A++AS  +       + G + V  T+  + +LS ++
Sbjct: 293 NDEVNQAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNV 352

Query: 247 SSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 306
             +++ +  +  R   IS VV  IR+I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 353 RDTSEQITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 412

Query: 307 NLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQ 366
            LA RTQ +T EI++MI  +Q+ ++ AV  M  S   AA+ + +  +A S LD I   + 
Sbjct: 413 ALAHRTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAIT 472

Query: 367 LLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDR 426
            +N+ N  IA A+ +Q++VA E++ NL ++REL   S    ++       M   A  L++
Sbjct: 473 GINERNILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQ 532

Query: 427 KITAFRV 433
            +  F+V
Sbjct: 533 LVNRFKV 539