Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (549), Expect = 2e-60
 Identities = 126/346 (36%), Positives = 201/346 (58%)

Query: 88  TLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARELEKT 147
           TLL I++ ++  +   R + R  +    V+  +A  +L++ + +   DE G + + +++ 
Sbjct: 295 TLLAIILGIIAAVIITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRM 354

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
              L++LI    D+  ++ S  E ++    +T      +  E DQ+ATAM EMS+TV  V
Sbjct: 355 GTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEV 414

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A +A+ AS    NA ++A+ G + V   I+++  L+ ++  S  A+ ++E+    I  V+
Sbjct: 415 ARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVM 474

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             I++++EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRTQ +TVEI+ +++ LQ
Sbjct: 475 DVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQ 534

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           S      ++M  S       V L   AG+ L  I   V  +  MN QIAAAA +QS VAE
Sbjct: 535 SGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAE 594

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           E++ ++ NVR++ E + +   E   +S  +     +L   ++ FR+
Sbjct: 595 EISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFRI 640