Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (560), Expect = 1e-61
 Identities = 139/377 (36%), Positives = 215/377 (57%), Gaps = 5/377 (1%)

Query: 62  SLLAATNSVEVAQ-QHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQT----QYLSDV 116
           S+LA +N +   Q +  D    +     +    + +VL + AA V+ RQ     Q   +V
Sbjct: 262 SMLATSNDLITRQNKSRDADSAKSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEV 321

Query: 117 IKLMAQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSM 176
           ++ +A  +LS  + +D KDE G +   +++    L++L+    D   ++ S  E ++   
Sbjct: 322 VERVASGDLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVT 381

Query: 177 SETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTI 236
            +T      +  E DQ+ATAM EM++TVQ VA +A+ AS     A +QA+ G++ V   I
Sbjct: 382 EQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAI 441

Query: 237 SKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGR 296
           +++  L+  + +S++A+  +++    I SV+  I+S++EQTNLLALNAAIEAARAGEAGR
Sbjct: 442 AQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGR 501

Query: 297 GFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGS 356
           GFAVVADEVR+LAQRTQ +T EI+ +I++LQS    A  +M+ S   +   VEL   AG 
Sbjct: 502 GFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGG 561

Query: 357 ELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEI 416
            L  I   V  +  MN QIAAAA +QS  AEE+N ++ NVR++ E +     E   +S  
Sbjct: 562 SLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVE 621

Query: 417 MQSNAEELDRKITAFRV 433
           +      L   ++ F V
Sbjct: 622 LARLGNHLQVLVSRFTV 638