Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (532), Expect = 2e-58
 Identities = 128/346 (36%), Positives = 198/346 (57%), Gaps = 6/346 (1%)

Query: 89  LLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQ-RNLSEPIKMDCKDEYGDVARELEKT 147
           L+ IV F+++     R ++     ++ VI  + + +NL+        DE  ++ +   + 
Sbjct: 280 LVAIVTFMII-----RAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEM 334

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
               + LI+   DA   +    + ++ + ++  D    + NE D +ATA++EM +T+  +
Sbjct: 335 VESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEI 394

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A++ + A+    +    AQ GQQ V+ TI K+  L++ +++SA  V ++E     I SV+
Sbjct: 395 AKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVL 454

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             IR I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ +T EI  +I  LQ
Sbjct: 455 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQ 514

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           S   S V LME S  Q  +  E   +AG+ L  I   V  + DM+ QIAAA  +QS+VA 
Sbjct: 515 SRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAA 574

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           E+N+N+  +R++ E S        + S+ ++  AE L R ++ FRV
Sbjct: 575 EVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620