Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (494), Expect = 4e-54
 Identities = 113/297 (38%), Positives = 167/297 (56%)

Query: 135 DEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLA 194
           DE G +A++L      L+ ++K   +A+  L    + +     +  D   ++ +E +Q A
Sbjct: 243 DELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQTA 302

Query: 195 TAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVN 254
           TAM+EM++ V  VA+ + +A+    NA + A  G   V+ +IS MS L+  I  +A  + 
Sbjct: 303 TAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIG 362

Query: 255 QVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQN 314
           ++      I  V+  I+SI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT  
Sbjct: 363 ELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSE 422

Query: 315 ATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQ 374
           +T EI+ MI  LQ    SAVN ME+ + Q  +  E    AGS L  IV  V  +  +N  
Sbjct: 423 STREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTH 482

Query: 375 IAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAF 431
           IA AA +QS VAE +N+++  + ++ + S     +L E    +   A  +  ++  F
Sbjct: 483 IATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTF 539