Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (493), Expect = 5e-54
 Identities = 113/289 (39%), Positives = 174/289 (60%), Gaps = 3/289 (1%)

Query: 134 KDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQL 193
           +DE+G +   L+K    L +L+K+    +  L+  +E     M ++      ++  +D +
Sbjct: 178 RDEFGTIGCALDKAMDTLTELVKVVKANADTLSDTSESFEREMKQSLQQINRQYVSLDSV 237

Query: 194 ATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAV 253
           ATAM EM+++ Q V+  ++ A+  TE  + Q ++  Q V+  IS + +LS  I  ++ +V
Sbjct: 238 ATAMEEMTASAQEVSNISRQATEKTEQDATQVESSFQRVQKAISDIEQLSGLIEQASSSV 297

Query: 254 NQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQ 313
             +      I+ V+ TI +ISEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ
Sbjct: 298 ATLNVNTTQINEVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ 357

Query: 314 NATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNF 373
            ATVEIQ MI +LQ  + +  N+ EK+V QA     +I N G+++ GI +  + + DM+ 
Sbjct: 358 AATVEIQAMIEKLQGESRNIANITEKTVSQAQSSSGVIANIGADVRGIADSSRAITDMSI 417

Query: 374 QIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAE 422
           QI+ +A +QS+VA  +   L+++R     S T+ T   ++SE +   AE
Sbjct: 418 QISTSAEEQSSVANSIAAELSDIR---NQSNTIRTVAEQSSEGVARLAE 463