Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  207 bits (528), Expect = 6e-58
 Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 1/346 (0%)

Query: 89  LLLIVVFVVLLLFAARVMLRQTQYLSDVI-KLMAQRNLSEPIKMDCKDEYGDVARELEKT 147
           +L+ +V +   L   R ++   Q +SD I ++ A ++L+        DE G +AR     
Sbjct: 275 ILITLVLIGFTLAIIRSIMEPVQRISDAISRIEATKDLTLRCDTKVDDEIGQIARHFNSM 334

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
               Q LI+  + + + +    + ++ +     +    + NE D +ATA++EM +T+  +
Sbjct: 335 VESFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEI 394

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A + + A+    N    AQ GQ  V+ TI K+  L+  ++ SAQ V+++E+    I SV+
Sbjct: 395 ASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVL 454

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             IR I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ +T EI  +I  LQ
Sbjct: 455 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQ 514

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           S   S V LME +  Q  +  +   +AG+ L+ I   V  + DM+ QIAAA  +QS VA 
Sbjct: 515 SRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVAS 574

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           E+N+N+  +R++   S     E  + S+ +++  + L + ++ F++
Sbjct: 575 EVNKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLFKI 620