Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  206 bits (523), Expect = 2e-57
 Identities = 124/365 (33%), Positives = 206/365 (56%), Gaps = 15/365 (4%)

Query: 81  LVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVI-----------KLMAQRNLSEPI 129
           L QV      ++++ +V L+F   V+L  + Y+S  +           K  A  +L+  +
Sbjct: 139 LDQVLSSAQSVVIISLVALIF---VILLSSYYISTFVGGALYTNVMALKRAADGDLTGRL 195

Query: 130 KM-DCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFN 188
              + KDE+  +A  ++    +   L+     AS ++ ++ +    +  E +  A E+  
Sbjct: 196 NFFEVKDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQ 255

Query: 189 EIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISS 248
            +D LATAM EM++ V+ VA +A+ +S+ T+ A+QQ + G + +  T+  + +L+ +I  
Sbjct: 256 HLDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGD 315

Query: 249 SAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 308
           ++ AVN + +    I  VV TI +ISEQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 316 ASTAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 375

Query: 309 AQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLL 368
           A RTQ ATVEI+ MI  LQ+ +++   +M+++V +A DG + +   G +L  I +  + +
Sbjct: 376 AGRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERV 435

Query: 369 NDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKI 428
            +M+  IA +A +QS VA E+  NL  +R           + +   + + + AE+LD+ +
Sbjct: 436 YEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLDQLL 495

Query: 429 TAFRV 433
              +V
Sbjct: 496 VGLKV 500