Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  207 bits (528), Expect = 6e-58
 Identities = 126/353 (35%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 81  LVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYL-SDVIKLMAQRNLSEPIKMDCKDEYGD 139
           +V V    L+  +V ++L LF  R +    ++L   V +     +LS  + +  KDE G 
Sbjct: 310 MVSVIVLMLVSGLVVILLSLFIGRYLHASLRHLYHKVTESQKHYDLSVRVDLKGKDEIGQ 369

Query: 140 VARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSE 199
           +           + +I +    +Q L + ++ M       ++      +E+DQ+A+AM+E
Sbjct: 370 LGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMREDVALGHSEVDQVASAMTE 429

Query: 200 MSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEER 259
           MS+TVQ +A++A  AS  +  A+++A+ G   V+ T   ++EL+++I+ +AQA+N ++E 
Sbjct: 430 MSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINELAQEIADAAQAINNLDED 489

Query: 260 VVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEI 319
           +  I  V+G I  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LAQR Q +T +I
Sbjct: 490 IKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRAQTSTEDI 549

Query: 320 QEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAA 379
           + M  +L+  A  AV  ME    +A   V     AG EL  IV++V +++ MN QIAAA 
Sbjct: 550 RSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRIVSEVSVIDSMNEQIAAAT 609

Query: 380 GQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFR 432
            +QS V+EE+N+N   + ++   +  V   L + +E + ++   +   ++ F+
Sbjct: 610 HEQSAVSEEVNQNAMKISDIYRNTHEVSDRLSQLNESLLNDVSAMSELVSKFK 662