Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (515), Expect = 2e-56
 Identities = 128/367 (34%), Positives = 203/367 (55%), Gaps = 6/367 (1%)

Query: 71  EVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLR----QTQYLSDVIKLMAQRNLS 126
           EV  +H ++  + +    L+L+ +  V++L AA+ M+       Q L D+ K   + +L+
Sbjct: 190 EVMTKHMNDKAMMILLFALVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAK--GEGDLT 247

Query: 127 EPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEE 186
           + + +   DE   + R   +   +LQ +IK    A+ E+ S  + ++   +         
Sbjct: 248 KRLDVQGSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISH 307

Query: 187 FNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDI 246
            NE DQ+ TA++EMS+T   VA      +  T+ A+Q     Q+ V S++ ++S L  +I
Sbjct: 308 NNETDQVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEI 367

Query: 247 SSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 306
             +A  +N + E+   I+SV+  I  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 368 DMAAGHINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 427

Query: 307 NLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQ 366
           +LA RTQ +T+EI EM+S+L +  + AV+ ME S       V         L  + + V 
Sbjct: 428 SLASRTQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVT 487

Query: 367 LLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDR 426
            +NDM+ QIA AA +QS+V EE+N N+  ++E+V   +       +TS+ + +    LD 
Sbjct: 488 SINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDT 547

Query: 427 KITAFRV 433
            +  F+V
Sbjct: 548 LVGQFKV 554