Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (556), Expect = 3e-61
 Identities = 128/354 (36%), Positives = 205/354 (57%), Gaps = 12/354 (3%)

Query: 90  LLIVVFVVLLLFAA----------RVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGD 139
           L+++ F+  L+  A          R +   T  L+D+ +   + +L+  I++  KDE   
Sbjct: 283 LIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAE--GEGDLTRRIEVKSKDEIAQ 340

Query: 140 VARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSE 199
           +A    +   ++   +    D++  L +  E M+   +ET+  A+ +  E +Q+ATAM+E
Sbjct: 341 LALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNE 400

Query: 200 MSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEER 259
           M++TVQ VA +A +A+    +AS+  + G+  V+  IS +S L+ +I+ +A+A+N++E  
Sbjct: 401 MAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERN 460

Query: 260 VVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEI 319
              I SV+  IR+I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +T EI
Sbjct: 461 TAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEI 520

Query: 320 QEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAA 379
           Q+MI  LQ SA S V+ M  S     + V L+  AG  L+ I   V  ++ MN QIA+AA
Sbjct: 521 QQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAA 580

Query: 380 GQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
            +Q  V+ E+N+N+NN+ ++   +     +     + +   +  L   +  FR+
Sbjct: 581 NEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634