Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  185 bits (469), Expect = 3e-51
 Identities = 110/320 (34%), Positives = 183/320 (57%)

Query: 92  IVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARELEKTRRQL 151
           + + V++L     ++L + + L    K +    L   I     D+ G +   L+    +L
Sbjct: 178 LAISVLVLFIGGNLILGRYRALVAKAKKIYDNPLMAYIYTGQSDDLGAIELALQMQNSEL 237

Query: 152 QDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHA 211
           + ++    D+  ++T   +V      E + ++Q +  EI+Q+ATAM +M++T+  ++ + 
Sbjct: 238 KSVLGRARDSCDKVTQEAKVSAAKGEEIQSTSQSQLAEIEQVATAMQQMTATLVDMSSNC 297

Query: 212 QNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGTIR 271
            +A+S ++ AS+Q   G + V STI  +  +++ + ++++ + ++E     I  V+  I+
Sbjct: 298 ADAASASQMASEQTINGDKTVVSTIHSIQTMAQQLHATSKVITELEGHSKDIGRVLDVIQ 357

Query: 272 SISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSAN 331
            I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT +AT EI  MI+ LQ   N
Sbjct: 358 GIAEQTNLLALNAAIEAARAGELGRGFAVVADEVRALAKRTHDATKEIHSMINLLQLGTN 417

Query: 332 SAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNE 391
            AV  M + V  A++ +     AG+ L  I   +  + DMN  IA+A  +QS+VA EMN 
Sbjct: 418 KAVRSMHEGVEAASECITTADLAGAALRTIREAIATITDMNHHIASAVEEQSSVANEMNR 477

Query: 392 NLNNVRELVEGSVTVMTELL 411
           ++ NV +    S  +  E++
Sbjct: 478 SVVNVSQFTHSSHQLGCEMV 497