Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (533), Expect = 2e-58
 Identities = 135/374 (36%), Positives = 213/374 (56%), Gaps = 9/374 (2%)

Query: 63  LLAATNSVEVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQY--LSDVIKLM 120
           L   T+ +  A +H    LV     TL +++V V+LL  +    L  + +   S V K  
Sbjct: 296 LKTTTDRLFTANKHMFFVLV-----TLTVVLVLVLLLSLSVIRYLHDSVHHVYSTVTKAR 350

Query: 121 AQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDAS-QELTSLTEVMTMSMSET 179
              +LS  +  +  DE+G++A          + +I LQ+ AS  +L    E M +     
Sbjct: 351 KHYDLSVRLTQNSSDEFGELAIAFNDMMNDFESVI-LQVRASASKLQQAVEQMDVCTHAM 409

Query: 180 KDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKM 239
           +       +E +Q+A+AM+EMS+TV  +A +A NAS  +  A+ +A+ G   V  T + +
Sbjct: 410 EQDVMAGHSEAEQVASAMTEMSATVAEIASNAVNASEASTAANHEAKAGNIEVGRTSAAI 469

Query: 240 SELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFA 299
             L+ DI  +++A+N+++  +  I  V+  I  I+EQTNLLALNAAIEAARAGE GRGFA
Sbjct: 470 KALANDIDGASKAINELDREIHGIVVVLDVISGIAEQTNLLALNAAIEAARAGEMGRGFA 529

Query: 300 VVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELD 359
           VVADEVR+LAQR+Q +T +I+ M  +L+S A+ AV  ME+ ++QA + V     AG EL 
Sbjct: 530 VVADEVRSLAQRSQTSTSDIKNMTDRLKSGASIAVKAMERGLMQANNSVHEAEQAGIELK 589

Query: 360 GIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQS 419
            IV QV +++ MN QIA A  +QS V+E++N N   + E+   +  +  EL E ++ +  
Sbjct: 590 RIVEQVDIIDRMNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDELRELTKALTY 649

Query: 420 NAEELDRKITAFRV 433
           +A  + +++  F V
Sbjct: 650 DAALMSKEVNKFHV 663