Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  208 bits (529), Expect = 4e-58
 Identities = 136/384 (35%), Positives = 210/384 (54%), Gaps = 13/384 (3%)

Query: 63  LLAATNSVEVAQQHYDNYLVQVFWQTL-----LLIVVFVVLLLFAA-------RVMLRQT 110
           L+AA    E +     N  ++    T      + I+VFV++ L  A       R ++   
Sbjct: 237 LIAANKLTEASADELHNLALKAIDDTESSSVNIGILVFVIIALILAVITYLIIRSIITPV 296

Query: 111 QYLSDVI-KLMAQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLT 169
           + ++ VI ++   ++L+       +DE G++A+         Q LI+  ID+   + +  
Sbjct: 297 ERITQVISRIEVSKDLTLRCDASTQDELGEIAQHFNSMVGSFQQLIEQVIDSVATINTSC 356

Query: 170 EVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQ 229
           + ++ +     +   ++ NE D +ATA++EM +T+  +A+  + A+         AQ GQ
Sbjct: 357 KSVSENAMLASEGVAQQLNETDMVATAITEMGATIDEIAKTTELAALKAGKTHDNAQLGQ 416

Query: 230 QFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAA 289
             V+ TI K+ +LS+ I+SSA  V+++E     I SV+  IR I+EQTNLLALNAAIEAA
Sbjct: 417 TEVEQTILKIRQLSEQINSSASVVDELERDSETIGSVLDVIRGIAEQTNLLALNAAIEAA 476

Query: 290 RAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVE 349
           RAGE GRGFAVVADEVR+LA RTQ +T EI  +I  LQS   + V LM+ S  Q A+  E
Sbjct: 477 RAGEQGRGFAVVADEVRSLAMRTQTSTQEIANIIQTLQSRTRAIVQLMDASQKQGAESAE 536

Query: 350 LITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTE 409
               AG  L  I   V  + DM+ QIAAA  +QS VA E+N+N+  +R++ E S      
Sbjct: 537 QAAAAGELLKLINTDVHNIMDMSTQIAAAIEEQSMVAAEVNKNVVVIRDIAEDSSRAADA 596

Query: 410 LLETSEIMQSNAEELDRKITAFRV 433
               S+ ++S AE L   ++ F++
Sbjct: 597 NASASDELKSRAEYLVSAVSHFKI 620