Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Type I secretion system, outer membrane component LapE # AggA from Pseudomonas fluorescens FW300-N2E2

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 97/415 (23%), Positives = 166/415 (40%), Gaps = 32/415 (7%)

Query: 24  NLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRSDQAP---- 79
           +L E         P+L      R +A E V  +R    P ++L AGY    SD       
Sbjct: 2   SLTEAIQSTIATHPELAQRVDSRLSANEDVKVARGGFFPSVDLNAGYGRGYSDNTNTRAL 61

Query: 80  --RESDLLS---AGINFSQELYQRSSWVSLDTAEKKARQADSQYA-ATQQGLILRVAKAY 133
               +++L+   + +   Q ++   +  +     +    + + YA  T Q L LR  + Y
Sbjct: 62  GNHHTNILTYTQSELRLRQMIFDGFNTANEVDRTQGVVNSRAYYAQGTAQDLALRTIEVY 121

Query: 134 FEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVLAEN 193
            EVL+ ++ +   +    A  R  +Q   R E G+ +  D   + A+         LAEN
Sbjct: 122 LEVLKRRELVTLAKNNLQAHLRVNDQIGLRTERGVGSTADSDQSNAR-------RALAEN 174

Query: 194 SLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQ----NLSLLAARI 249
           +   +   L +     YS +  +  +      T     A + +AQQ     N  L +A+ 
Sbjct: 175 NYDTAQVDLADAEANFYSVVGRMPDELETPPSTKGEIPADLREAQQSMVDNNPYLKSAQA 234

Query: 250 SQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYND--FKIGVNLKVPLY 307
               A     +A S   P    +      NN         GEE +D  +++GV +   L+
Sbjct: 235 DIQSAESQYEVAKSPFYPRFDAEAAVGANNN-------IGGEEGHDNNWRVGVVMNYNLF 287

Query: 308 TGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVR-AYNNNINASIGALRAYEQAVISAK 366
            GG+  +           A      A R + +D R A+N  +NA      A E A  +A+
Sbjct: 288 RGGSDKARLASNAHQINQAMDIRNNALRQLNEDTRLAWNAMLNARKQTPTAREYADTTAR 347

Query: 367 SALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTL 421
               A +  F +G RT++D+LD+   LY+AN+  +  RY    S+ ++   +G L
Sbjct: 348 -VRAAYQDQFGLGQRTLLDLLDSENELYNANRRYTEVRYTEEYSMYRVLANMGLL 401