Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., ABC-type protease exporter, outer membrane component PrtF/AprF from Pseudomonas fluorescens FW300-N2E2

 Score =  173 bits (439), Expect = 9e-48
 Identities = 120/441 (27%), Positives = 204/441 (46%), Gaps = 25/441 (5%)

Query: 8   FVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLT 67
           +V+    ++ +  WA    E Y +A  NDP  L    +RDA  E     R+ LLP +   
Sbjct: 6   WVAVLAASVCNNAWAMGPFEFYERALRNDPVYLGAIKERDAGLENRAIGRAGLLPHL--- 62

Query: 68  AGYNINR---------------SDQAPRESDLLSAGINFSQELYQRSSWVSLDTAEKKAR 112
            GY+ N+               S    R      + +   Q L    ++ +      +A 
Sbjct: 63  -GYSYNKGRNQSKVTYLNDRGASQHDDRNYSSYGSSLTLQQPLLDYEAYAAYRKGVAQAL 121

Query: 113 QADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAIT 172
            AD  +    Q L++RV   Y + L AQD ++  +A+K A  +Q  Q +  F  G    T
Sbjct: 122 FADENFRGKSQELLVRVLSHYTQALFAQDQIDIAQAKKKAFEQQFRQNEHLFRQGEGTRT 181

Query: 173 DVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQ---EYSKLAVLDTKRFAASRTTES 229
           D+ +AQA+++  +A+E+ A +    +   L  + G    +   LA L       +    S
Sbjct: 182 DILEAQARYELAIAEEIEARDEQDAALRELGSLIGVPALDIGDLAPLHDTFQTFALQPAS 241

Query: 230 SEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTS 289
            +   E A   N SL + R + DVAR  +    +GHLP ++    Y     +   + NT 
Sbjct: 242 FDTWHELAVSNNPSLASQRQAVDVARFEVERNRAGHLPKVS---AYATMRQNESESGNTY 298

Query: 290 GEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNIN 349
            + Y+   IG+ + VPLY GG  ++ T+QA      A  +L+A  R  + ++R   +   
Sbjct: 299 NQRYDTNTIGLEVSVPLYAGGGVSASTRQASRTMEQAEYELDAKTRETLIELRRQFSACV 358

Query: 350 ASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYIL 409
           + +  LRAY++A+ SA++ + +T      G R  +D L+A ++LY   ++L+ ARYDY++
Sbjct: 359 SGVNKLRAYQKALSSAEALVVSTRQSILGGERVNLDALNAEQQLYSTRRDLAQARYDYLM 418

Query: 410 SVLQLRQAIGTLSEQDVMDVN 430
           +  +L    GTL  QD+  V+
Sbjct: 419 AWTKLHYYAGTLGPQDLAKVD 439