Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score =  177 bits (450), Expect = 5e-49
 Identities = 122/426 (28%), Positives = 210/426 (49%), Gaps = 20/426 (4%)

Query: 27  EIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRSDQAP------- 79
           ++Y  A  NDP  L    +RDA  E     R+ LLP+++ +  YN  R+D          
Sbjct: 29  QVYELALRNDPVYLGALKERDAGLENRVIGRAGLLPRVSYS--YNKGRNDSKATLKGSAQ 86

Query: 80  -----RESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILRVAKAYF 134
                R  +   + +   Q L    ++ +      +A  AD  + +  Q L++RV   Y 
Sbjct: 87  DTTDHRHYNSFGSSLTVQQPLIDYEAYANYRKGLAQALFADETFRSKSQELLVRVLTLYT 146

Query: 135 EVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVLAENS 194
           + L AQD +   RA++ A  RQ  Q +Q FE G    TD+ +A+++ +  +A+++ A + 
Sbjct: 147 QALFAQDQINIARAKQQAFERQFAQNRQMFERGEGTRTDILEAESRNELAIAEQIEASDE 206

Query: 195 LTNSYEALREITGQEYSKLAVLDTKR--FAASRTTESSEALIEKAQQQNLSLLAA-RISQ 251
              +   L  + G+    +A L+  R  F A     SS          N  +LA+ R S 
Sbjct: 207 QDAALRELAALLGEPSIDVAQLEPLRDSFQALVLAPSSFTEWHALAMANSPILASQRQSL 266

Query: 252 DVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYTGGN 311
           +VAR  +    +GHLP  T++   +   N +D+  NT  + Y+   IG+ L +PLY GG 
Sbjct: 267 EVARYEVERNRAGHLP--TVNAYASIRQNESDSG-NTYNQRYDTNTIGIELSLPLYAGGG 323

Query: 312 TTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVISAKSALEA 371
           T++  +QA      A  +LE   R  + ++R   N   + +  LRAY++A+ISA++ +E+
Sbjct: 324 TSASVRQANSKREQAEYELEGKTRETLIELRRQFNACASGVNKLRAYQKALISAQALVES 383

Query: 372 TEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTLSEQDVMDVNA 431
           T      G R  +D L+A ++LY   ++L+ ARYDY+++ ++L    GTL + D+  ++ 
Sbjct: 384 TRQSILGGERISLDALNAEQQLYSTRRDLAKARYDYLMAWIKLHYYAGTLRDTDLARIDE 443

Query: 432 GLKVAK 437
              VA+
Sbjct: 444 AFVVAR 449