Pairwise Alignments
Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056
Subject, 469 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a
Score = 180 bits (457), Expect = 7e-50
Identities = 119/425 (28%), Positives = 207/425 (48%), Gaps = 5/425 (1%)
Query: 11 AALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGY 70
AA S++ ++ +L ++Y +A+ DP++LS + +A ++ + LLPQ+ Y
Sbjct: 28 AAPQVTSASAYSVDLMKLYREARLEDPRMLSAYLRAQSAVDSERDAFGGLLPQVTANGSY 87
Query: 71 N-INRSDQAPRES-DLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILR 128
N I R D RE + S +N +Q LY + +W + A+ Q Q Q +
Sbjct: 88 NRILRKDDTQREIYNNSSYSLNLTQYLYNKQAWEAYQKAKSTTEQKGHQAEDAQAEATVD 147
Query: 129 VAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADE 188
+AK YF+ L A D LE + AE+ A + L++ ++ ++ +TD+ D +A+ D + A E
Sbjct: 148 LAKRYFQALSADDELELIMAERRATQKSLDRVSAMYDKKMAVVTDLLDLKARVDLLAAQE 207
Query: 189 VLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSLLAAR 248
V A N + S AL EI G+ ++ A ++S + + +A N L A
Sbjct: 208 VDARNQIRLSRAALSEIVGRPITEPLSRIRNDIALQAPSKSMDTWVAQAIDSNPLLKARE 267
Query: 249 ISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYT 308
S DVA + GH P+LT G + DN + + Y + ++VP+Y+
Sbjct: 268 SSLDVANAAVREGKGGHYPTLTFTLGAQQSDVGYDNTLSPRSDSY---VATIGVRVPIYS 324
Query: 309 GGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVISAKSA 368
GG+T++ + +A QD+E+ R VVK+ +S+ +RA + A+ SA+ +
Sbjct: 325 GGSTSARVRGLYNEQLATEQDVESVRRQVVKETTNAYLTAFSSVEKIRANKNALASAEQS 384
Query: 369 LEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTLSEQDVMD 428
A + F G VDVL + + + A ++L A+YD+I ++ L + G ++ V
Sbjct: 385 SIAAQKAFSYGVVNAVDVLTSVQNEFKARRDLLRAQYDFITNLFILNRWAGRPPQESVDS 444
Query: 429 VNAGL 433
VN L
Sbjct: 445 VNVWL 449