Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., outer membrane secretion protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 2e-26
 Identities = 107/437 (24%), Positives = 189/437 (43%), Gaps = 25/437 (5%)

Query: 9   VSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTA 68
           VS ++     AV AE +     +A  N+P L +  A   A  E V  +++   PQI+ +A
Sbjct: 14  VSTSVLLAPHAVLAETIFGAMAKAYANNPDLNAARAGLRATDEGVPIAKAGYRPQISASA 73

Query: 69  GYNINRSDQ---APRESDLLSAGINFSQELYQRSSWVSLDTAEKKARQAD-----SQYAA 120
              ++R D      R+      GI+ +Q ++     ++      +A QAD         A
Sbjct: 74  TGTLSRVDAERTGTRDFHSGQVGISITQTIFDGFQTLN----NVRAAQADVFSSRETLKA 129

Query: 121 TQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQ 180
            +  ++L  A++Y  + R Q  +   R   A +  QL   + R EVG    TDV  A+A+
Sbjct: 130 NEIQILLSAAQSYANIARDQQVVSIRRQNLAFLREQLSAAQARLEVGEGTRTDVSQAEAE 189

Query: 181 FDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQ 240
                +  V A   L  S     +I G   + +        A  R+ + + A      ++
Sbjct: 190 LANAQSLLVAAIAQLKQSEAVYVQIVGAAPTGIRQPGPATKAMPRSLDQAVAT---GLRE 246

Query: 241 NLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGV 300
           N  +LAA+ + D A   +  A    LP + L G       S +      G +     +  
Sbjct: 247 NPQILAAQYAVDSAGYQVKSAEGTMLPGVVLQGAV-----SRNTGNAGQGLDDTTASVTA 301

Query: 301 NLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQ 360
            L+VP+Y GG      +QA+         +++A  SV + V + +  + +++  +RA   
Sbjct: 302 RLEVPIYQGGAEYGQIRQAKEILGQQRILVDSARASVQQTVVSAHAQLESALARIRASRS 361

Query: 361 AVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGT 420
            + +A  ALE       VG RT +DVL + + + DA + L+ A+ D +++   L  A+G 
Sbjct: 362 QIAAANLALEGVVEERKVGQRTTLDVLISQQDVLDAQEALAGAQRDAVVASYALLAAMGH 421

Query: 421 LSEQDVMDVNAGLKVAK 437
           L+ +     + GL+VA+
Sbjct: 422 LTVR-----SQGLQVAE 433