Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., efflux transporter outer membrane subunit from Rhodopseudomonas palustris CGA009

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 105/422 (24%), Positives = 169/422 (40%), Gaps = 48/422 (11%)

Query: 26  AEIYNQAKENDPQLLSVAAQRDAAFEAVTSSR---SALLPQIN--------LTAGYNINR 74
           AE+    +E     L VAA      +A   +R   +ALLP ++         T+G NI+ 
Sbjct: 67  AELTQLMEEAQTVNLDVAAAVARIRQADAQARITGAALLPSLSGSGNGSQVKTSGSNISN 126

Query: 75  SDQAPRESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILR----VA 130
           +  A R     S+ ++ S E+     W     A   A +  +     +  ++L     VA
Sbjct: 127 TTIAGRRYSTYSSSLSASYEI---DFWGKNHDAALAAEETATANRFDRDTVMLTTMASVA 183

Query: 131 KAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVL 190
            AYF+VL AQD +        +  R L+  KQR + G     DV    AQ + VLA++  
Sbjct: 184 NAYFQVLAAQDRIRTAEGNIKSASRILDAIKQRLKAGTGTDLDV----AQQESVLANQRA 239

Query: 191 A----ENSLTNSYEALREITGQ--EYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSL 244
           A      +L  +  AL  +  +  E  K+A     R ++ R T    + +   Q+ ++  
Sbjct: 240 ALPPLRLTLAQNVNALATLVARPPESVKIAGGSLTRLSSPRVTPGLPSDL-LTQRPDIRR 298

Query: 245 LAARISQDVARDNISLASSGHLPS--LTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNL 302
             A+++   A  N+  A +   P+  LT  GGY      +    +    +     I   L
Sbjct: 299 QEAQLASATA--NVGSARAQFFPTIQLTAQGGY-----QSAALASLFTPQATFSNIAAGL 351

Query: 303 KVPLYTGGNTTSLTKQAEFAYVAASQ-DLEAAYRSVV----KDVRAYNNNINASIGALRA 357
             P++ GG       Q  F    A Q +L   YR  V     DV     +I  +   LR 
Sbjct: 352 TQPIFDGGRI-----QGNFDLTQAQQEELLQTYRKTVVSAFADVDNALESIKQNTERLRL 406

Query: 358 YEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQA 417
             + V S++ A +  E     GT  IV VL+    L+ A   L   +     +++ L QA
Sbjct: 407 QREVVASSRRAFDLAEQQLRAGTSDIVTVLNTQLTLFQAEDALIQTQLARFQAIVSLFQA 466

Query: 418 IG 419
           +G
Sbjct: 467 LG 468