Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., outer membrane protein from Dechlorosoma suillum PS

 Score =  125 bits (315), Expect = 2e-33
 Identities = 116/427 (27%), Positives = 191/427 (44%), Gaps = 21/427 (4%)

Query: 22  AENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRSDQAPRE 81
           A +L E+  +A  ++PQ   V A   A    V  +++A LP ++L+AG + NR+D    E
Sbjct: 66  ALSLTEVVERALCHNPQTREVWANARAQAALVGVAQAAYLPGLSLSAGQSRNRNDSRKPE 125

Query: 82  S-DLLSAGINFSQELYQRSSWVS-LDTAEKKARQADSQYAATQQGLILRVAKAYFEVLRA 139
           S    +AG+  S  L+   +  + L+ A +    A +   +T Q + L   +AY++V   
Sbjct: 126 SYTQKNAGLTLSYLLFDFGARAATLENARQLLAAAAATQDSTVQAVFLAALQAYYQVQAT 185

Query: 140 QDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVLAENSLTNSY 199
           +  L   R  + A          R++VG +   D   AQ  +       + A+    N+ 
Sbjct: 186 EAALVAARESERASLESFNAADARYKVGTATPADRLQAQTAYSQASLKRIQADRDFKNAQ 245

Query: 200 EALREITGQEYSKLAVLDTKRFAASRTTESS---EALIEKAQQQNLSLLAARISQDVARD 256
             L  + G E  +   L       + T E +   +AL+ +A+++   L+AA      A+ 
Sbjct: 246 GTLANVIGGEAHRPPALVPATPVVAPTREFTADVDALVAEARRRRPDLVAAEAQYQAAQA 305

Query: 257 NISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLT 316
           N+  A +  LP+L+L  G  Y  +   N  NTS        IGV L VPL+TG +TT   
Sbjct: 306 NVEAARAAGLPTLSLTAGPAY-QDLGGNVSNTSS-------IGVTLNVPLFTGFSTTYKV 357

Query: 317 KQAEFAYVAASQDLEAAYRSVVKDV-RAYNNNINASIGALRAYEQAVISAKSALEATEAG 375
           + AE    A     E   + V  DV +AY   I A   +L+     ++SA++A +     
Sbjct: 358 RNAESLKEAREAQRERIRQQVALDVWKAYQGLITAG-QSLQTTADLLVSAEAAEKVALGR 416

Query: 376 FDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTL------SEQDVMDV 429
           +  G  +I+DVL+A   L  A +    A +++ +S   L Q++G L      S  D    
Sbjct: 417 YKAGLGSILDVLNAQSALAAARQQRVQATFEWNVSRATLAQSMGNLDISLLQSLPDAATA 476

Query: 430 NAGLKVA 436
           NAG   A
Sbjct: 477 NAGQSAA 483



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 6   PLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQIN 65
           P  V A      +  +  ++  +  +A+   P L++  AQ  AA   V ++R+A LP ++
Sbjct: 260 PALVPATPVVAPTREFTADVDALVAEARRRRPDLVAAEAQYQAAQANVEAARAAGLPTLS 319

Query: 66  LTAGYNINRSDQAPRESDLLSAGINFSQELYQR-SSWVSLDTAEKKARQADSQYAATQQG 124
           LTAG      D     S+  S G+  +  L+   S+   +  AE      ++Q    +Q 
Sbjct: 320 LTAGPAY--QDLGGNVSNTSSIGVTLNVPLFTGFSTTYKVRNAESLKEAREAQRERIRQQ 377

Query: 125 LILRVAKAYFEVLRAQDNLEFV--------RAEKAAVGRQLEQTKQRFEVGLSAITDVHD 176
           + L V KAY  ++ A  +L+           AEK A+G        R++ GL +I DV +
Sbjct: 378 VALDVWKAYQGLITAGQSLQTTADLLVSAEAAEKVALG--------RYKAGLGSILDVLN 429

Query: 177 AQA 179
           AQ+
Sbjct: 430 AQS 432