Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., type I secretion outer membrane protein, TolC family from Dechlorosoma suillum PS

 Score =  223 bits (567), Expect = 1e-62
 Identities = 131/428 (30%), Positives = 230/428 (53%), Gaps = 13/428 (3%)

Query: 16  LSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRS 75
           +++A    +L +IY +A +ND Q  +     +A  E +   R+ LLP + ++     N  
Sbjct: 15  IAAAAQGADLLQIYKEALDNDAQFTAAKHTLEAGREKLPQGRAGLLPTLGVSVNTMWNDV 74

Query: 76  DQAPRESDLLSA---------GINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLI 126
           +   R S    A          ++ SQ L++  +W+  D A+ +  QA++Q+   +Q LI
Sbjct: 75  EYQRRVSGAAVATGQYNSHGYSVSLSQPLFRWQNWMQYDQAKLQVAQAEAQFLQARQDLI 134

Query: 127 LRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLA 186
           LRVA+AYF+VL AQ+NL  ++A+K+A+ +QLE  K+ FEVG + ITD H+AQ+++D   A
Sbjct: 135 LRVAQAYFDVLYAQENLRSLQAQKSAIAQQLELAKKSFEVGTATITDTHEAQSRYDLSTA 194

Query: 187 DEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSLLA 246
            E+ AE+ L      L+ I G+E  +LA L T          +    +  A++  L++  
Sbjct: 195 QEIAAESDLEIKRRNLQAIIGREAGELATLRTDTTLEPPKPANMNDWVASAEKDALAVQI 254

Query: 247 ARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNT----SGEEYNDFKIGVNL 302
                ++    +S   +GH P+L L    +    +N    N      G E +   IG+ L
Sbjct: 255 QEAQLEITDKEVSKQRAGHFPTLDLVATRSNAVQTNGVQTNPLFPGVGYEQDSTAIGLQL 314

Query: 303 KVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAV 362
            +PL+ GG   S  ++AE +  A    LE + R      R Y   +   +  +RA E A+
Sbjct: 315 NIPLFQGGAVLSKQREAEASREATRSTLEYSRRQAALGARQYYLGVVNGLAQVRALEAAL 374

Query: 363 ISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTLS 422
           +S+KSAL++ + G++VG R  +DVL+A +++Y   ++L+ AR+D +++ L+L+  +G+L+
Sbjct: 375 VSSKSALDSNKLGYEVGVRINIDVLNAEQQVYSTQRDLAKARFDTLVNQLRLKGVVGSLT 434

Query: 423 EQDVMDVN 430
           ++D+  VN
Sbjct: 435 DEDLQRVN 442