Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., type I secretion outer membrane protein, TolC family from Marinobacter adhaerens HP15

 Score =  240 bits (613), Expect = 6e-68
 Identities = 160/445 (35%), Positives = 245/445 (55%), Gaps = 13/445 (2%)

Query: 1   MKKLLPLFVSAALGTLSSA-VWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSA 59
           MKK L   +S  +G +++    + +L E Y +A   D  + +  A  +A   A   S+SA
Sbjct: 1   MKKRL---LSGLIGLMAAQPALSMDLVETYEKALSYDSGIAAARASFEAQQAASDVSQSA 57

Query: 60  LLPQINLTAGYNINRSDQAPRESDL--LSAGINFSQELYQRSSWVSLDTAEKKARQADSQ 117
           LLPQI      N    D   +++    L+ G+  +Q L++  +W   D ++ +   A ++
Sbjct: 58  LLPQIGAFGEGNYIDVDGPSQDNSYQELNYGVQLTQPLFRADAWFRYDASKFQTESARAE 117

Query: 118 YAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDA 177
           Y   QQ LIL VA AYF VLRA+D +   RA +AA+ RQ EQ ++RF+VGL AIT+V++A
Sbjct: 118 YNLAQQQLILDVATAYFNVLRARDTVTTARATEAAIQRQYEQAQERFDVGLIAITEVYEA 177

Query: 178 QAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEK- 236
           +A +D   +  + AEN L  + E L  +TG+   +L  L  + F   R      +  E  
Sbjct: 178 RASYDDSKSQRIAAENQLNVAREQLARLTGEYAEELDNL-RQNFPLGRPDPMDPSAWEAT 236

Query: 237 AQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGN-NSND--NAKNTSGEEY 293
           A +QN S+ +A    +     +  A +GH P+L L+  Y   + N  D  NA  TS ++ 
Sbjct: 237 ALEQNWSIQSALFELNANEAGLREAKAGHYPTLDLNASYGKTDLNGIDGANAPITSQQDG 296

Query: 294 NDFK--IGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINAS 351
              +  IG+ L VPLY+GG T +  +Q       A Q L    R V  + R+    +N +
Sbjct: 297 TTTRGTIGLTLNVPLYSGGGTQAGVRQQRSLVTVAEQSLNTVRRDVRVNTRSLFLTVNNN 356

Query: 352 IGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSV 411
           +    A EQ ++S +SAL+AT AG++VGTR IV+VLDA R  Y A ++ +NARYDY+++ 
Sbjct: 357 VETASALEQTIVSRRSALDATRAGYEVGTRNIVEVLDAERAYYVALRDYANARYDYVINS 416

Query: 412 LQLRQAIGTLSEQDVMDVNAGLKVA 436
           LQL+QA GTLS QD++++N  L  A
Sbjct: 417 LQLKQAAGTLSPQDLIELNNWLSAA 441