Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., type I secretion outer membrane protein RsaFa from Caulobacter crescentus NA1000

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 101/427 (23%), Positives = 181/427 (42%), Gaps = 19/427 (4%)

Query: 4   LLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQ 63
           L+ L ++ A+   +    AE LAE    A +++P + +  A   A  E  T +RSA   Q
Sbjct: 14  LIALAMAMAVVGRADLAHAETLAEAITAAYQSNPNIQAQRAAMRALDENYTQARSAYGLQ 73

Query: 64  INLTA--------GYNINRSDQAPRESDLLSAGINFSQELYQRSSWVS-LDTAEKKARQA 114
            + +         G N     +A  ++  LS     SQ LY    + + L   E + + A
Sbjct: 74  ASASVAEVYGWSKGVNAKNGVEAASQTSTLS----LSQSLYTNGRFSARLAGVEAQIKAA 129

Query: 115 DSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDV 174
                  +  L++RV  AY  V R ++ L   +  +A + +QL+ T+ ++ V    +TDV
Sbjct: 130 RENLRRIEMDLLVRVTNAYISVRRDREILRISQGGEAWLQKQLKDTEDKYSVRQVTLTDV 189

Query: 175 HDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALI 234
             A+A+          A+  L  S      + G++      L+ +       T   EA  
Sbjct: 190 QQAKARLASASTQVANAQAQLNVSVAFYASLVGRQPE---TLEPEPDIDGLPTTLDEA-F 245

Query: 235 EKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYN 294
            +A+Q N  LLAA  ++  +R  ++ A +  L S+     Y  G+++   A+   G   +
Sbjct: 246 NQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARADYRNGSSTPYYAR--GGLRED 303

Query: 295 DFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGA 354
                + L  PL+T G   +  +Q+          +E A RS+V  V  Y +++ A+  +
Sbjct: 304 TVNASITLTQPLFTSGQLNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLVAARKS 363

Query: 355 LRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQL 414
           L + E+ + +   A            R+ ++VL+A   L +A  N    R +  +  L L
Sbjct: 364 LVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQAELQNAQINFVRGRANEYVGRLHL 423

Query: 415 RQAIGTL 421
              +GTL
Sbjct: 424 LAQVGTL 430