Pairwise Alignments

Query, 272 a.a., 3',5'-cyclic-AMP phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  111 bits (278), Expect = 1e-29
 Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 11/245 (4%)

Query: 11  SIKLIQITDTHLFAAEDGSLLSVNTADSFAAVVAAIGEEQVEFDAILATGDISQDHTPES 70
           ++ + QITD HL      +L    T    AAV A +  +Q   D +L +GD+S+D +P S
Sbjct: 2   TLSIAQITDLHLLVDPQAALRGCVTTPRAAAVFANL--KQRSPDLLLLSGDLSEDGSPAS 59

Query: 71  YQRFVRGIQPLKKACYWLPGNHDYKPSMHSVLPTQQIQAVEHVLLGEHWQVVLLDSQVVG 130
           Y+R    ++ L      + GNHD    +  +         E V   + W+++ LDS    
Sbjct: 60  YERLRDWVEELGCPAIAIAGNHDQPERLTEICGRSPFMG-EPVYSIQGWRIIALDSYQPK 118

Query: 131 VPHGKLSEQQLQLLDNKLTEYPERHTLVLLHHHPLLVGSAWLDQHTLKESERFWDVVAKH 190
              G+L   QL  LD +L E     TL++LHH P+L+G   +D   LK+   F +V+A H
Sbjct: 119 RIDGRLRGDQLDWLDQRLGE-DSSPTLLMLHHPPVLIGVTKMDAIGLKDGPEFLEVIAHH 177

Query: 191 SNVKAILCGHVHQDMDRIHLGARVMATPSTCVQFKPNSQDFALDNCSPGWRELTLHADGQ 250
             V+ +L GH HQ   +       +  P+T +QF              GWR L L  DG 
Sbjct: 178 QQVRLVLSGHAHQAFIQGRGLTTFLGCPATAMQFDQ-------PELPAGWRSLELEPDGS 230

Query: 251 VSTQV 255
             +Q+
Sbjct: 231 WRSQI 235