Pairwise Alignments

Query, 272 a.a., 3',5'-cyclic-AMP phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., lacZ expression regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  243 bits (620), Expect = 3e-69
 Identities = 122/272 (44%), Positives = 173/272 (63%), Gaps = 5/272 (1%)

Query: 5   SQSEDSSIKLIQITDTHLFAAEDGSLLSVNTADSFAAVVAAIGEEQVEFDAILATGDISQ 64
           S +E  + +L+QITD HLFA+ DG LL VNT+ S AAV+  +         +LATGDISQ
Sbjct: 9   SLAEGEAARLVQITDPHLFASNDGQLLGVNTSQSLAAVLNTLNATHYPAHLMLATGDISQ 68

Query: 65  DHTPESYQRFVRGIQPLKKACYWLPGNHDYKPSMHSVLPTQQIQAVEHVLLGEHWQVVLL 124
           D+TP+SY+ FV+ I+ L   C++LPGNHD    M+  +   ++   + +L+G +W +++L
Sbjct: 69  DYTPDSYRNFVQAIEFLGLPCHYLPGNHDDPRVMNLHMQGPRVFGQQRILIG-NWHILML 127

Query: 125 DSQVVGVPHGKLSEQQLQLLDNKLTEYPERHTLVLLHHHPLLVGSAWLDQHTLKESERFW 184
           DS V G P G + E Q  L+D  +  YP  HTL+++HH+P+L+  AWLDQH +     F 
Sbjct: 128 DSTVRGKPGGHMGELQFSLIDQAIAAYPNHHTLLVMHHNPILMDCAWLDQHCMDNGSDFL 187

Query: 185 DVVAKHSNVKAILCGHVHQDMDRIHLGAR----VMATPSTCVQFKPNSQDFALDNCSPGW 240
             V+ +  VK IL GHVHQ +D ++  A     +MATPSTC+QFKP S  FALD+  PG+
Sbjct: 188 ARVSAYPQVKGILWGHVHQAVDEVYATANGQLPLMATPSTCIQFKPKSPYFALDHLQPGY 247

Query: 241 RELTLHADGQVSTQVKRLKQGRFLPDFNSNGY 272
           R L L +DG + T V R+   RF PD +S+GY
Sbjct: 248 RLLELLSDGSIHTHVYRVPGNRFAPDHSSSGY 279