Pairwise Alignments

Query, 272 a.a., 3',5'-cyclic-AMP phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Class III cyclic nucleotide phosphodiesterase (cNMP PDE) from Mycobacterium tuberculosis H37Rv

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 11/216 (5%)

Query: 14  LIQITDTHLFAAEDGSLLSVNTADSFAAVVAAIGEEQVEFDAILATGDISQDHTPESYQR 73
           L+ I+DTHL   +     +V+  D    ++  + +  +  DAI+ TGD++    P +Y++
Sbjct: 16  LLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRK 75

Query: 74  FVRGIQP----LKKACYWLPGNHDYKPSMHSVL--PTQQIQAVEHVLLGEHWQVVLLDSQ 127
               ++P    L     W+ GNHD +  +   L      +  ++ V + +  ++++LD+ 
Sbjct: 76  LRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTS 135

Query: 128 VVGVPHGKLSEQQLQLLDNKLTEYPERHTLVLLHHHPLLVGSAWLDQHTLKE--SERFWD 185
           V G  HG++   QL  L  +L       T++ LHH P+    + LD     E   +    
Sbjct: 136 VPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPI---PSVLDMAVTVELRDQAALG 192

Query: 186 VVAKHSNVKAILCGHVHQDMDRIHLGARVMATPSTC 221
            V + ++V+AIL GH+H   +   +G  V    +TC
Sbjct: 193 RVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATC 228