Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Topoisomerase IV subunit B (EC 5.99.1.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  920 bits (2377), Expect = 0.0
 Identities = 454/624 (72%), Positives = 522/624 (83%), Gaps = 2/624 (0%)

Query: 5   YNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILHADQS 64
           YNA AIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAG+A+ +QVILHAD S
Sbjct: 9   YNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHATSVQVILHADHS 68

Query: 65  LEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124
           LEV DDGRGMPVDIHPEE VSGVELIL KLHAGGKFSNKNYQFSGGLHGVGISVVNALS 
Sbjct: 69  LEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALST 128

Query: 125 RVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRL 184
            V V V+RDG  Y++ F  G K TEL V GT G+RNTGTSV F PD KYFDSP FS+SRL
Sbjct: 129 EVRVRVKRDGNEYQMTFADGYKKTELEVIGTVGKRNTGTSVFFAPDPKYFDSPKFSISRL 188

Query: 185 INNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTA 244
            + L+AKAVLCPGL + F DK    +  W YEDGL+ YL + V  +  LP+EPF G    
Sbjct: 189 KHVLKAKAVLCPGLLVSFEDKATGEKVEWHYEDGLRSYLVDAVSEFERLPDEPFCGSLAG 248

Query: 245 QTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 304
             EA  WA++WLPEGG+ + ESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFR+LLPRG
Sbjct: 249 NKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRSLLPRG 308

Query: 305 VKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQL 364
           VKL  EDV++R A+VLS+KMQ+PQF+GQTKERLSSR++AAFVSGVVKDAFSLWLN  P+ 
Sbjct: 309 VKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNAHPET 368

Query: 365 AEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGDSAGG 424
              LAE+ I NA  R++ASKKV RK+I  GPALPGKL DC  QD  R+ELFLVEGDSAGG
Sbjct: 369 GMLLAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFLVEGDSAGG 428

Query: 425 SAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEALRYGK 484
           SAKQARD+EFQA++PLRGKILNTWEV   +VLASQEVH+I+VA+G+DP S ++  LRYGK
Sbjct: 429 SAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGSTDIAQLRYGK 488

Query: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
           +CILADADSDGLHIATLLCALF +HFR LV AGHVYVAMPPLYRID GKE++YALD+ E+
Sbjct: 489 ICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAER 548

Query: 545 EGVLERL--SQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMD 602
           +G+L+RL   +K+ K  V RFKGLGEMNP QLRETTMDPNTRRLVQLT++D +AT EMMD
Sbjct: 549 DGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLEDFDATSEMMD 608

Query: 603 MLLGKKRADDRRAWLQRNGDMAEV 626
           MLL KKRA DR++WL+  G++AEV
Sbjct: 609 MLLAKKRAGDRKSWLESKGNLAEV 632