Pairwise Alignments

Query, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., DNA topoisomerase IV, B subunit, proteobacterial from Pseudomonas stutzeri RCH2

 Score =  931 bits (2405), Expect = 0.0
 Identities = 458/624 (73%), Positives = 523/624 (83%), Gaps = 2/624 (0%)

Query: 5   YNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGYASKIQVILHADQS 64
           Y A AIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAG+A  +QVILH D S
Sbjct: 34  YTAEAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHQDNS 93

Query: 65  LEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVNALSK 124
           LEVIDDGRGMPVDIHPEE V GVELIL KLHAGGKFSNKNYQFSGGLHGVGISVVNALS 
Sbjct: 94  LEVIDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALST 153

Query: 125 RVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRL 184
           RVEV V+RDG  Y ++F  G K T+L V G+ G+RNTGTSV FW D KYFDSP FS+SRL
Sbjct: 154 RVEVTVKRDGSEYRMSFADGFKATDLEVIGSVGKRNTGTSVRFWADPKYFDSPKFSISRL 213

Query: 185 INNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTA 244
            + L+AKAVLCPGL + F DK +  +  W YEDGL+ YL + V  Y  LP+EPF G    
Sbjct: 214 KHVLKAKAVLCPGLSVSFEDKGSGEKVEWHYEDGLRSYLVDSVSDYLRLPDEPFVGTLAG 273

Query: 245 QTEAATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 304
            TEA  WA++WLPEGGE + ESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG
Sbjct: 274 NTEAVDWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRG 333

Query: 305 VKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQL 364
           +KL  ED+++R A+VLS+KMQ+PQF+GQTKERLSSR++AAFVSGVVKDAFSLWLN  P+L
Sbjct: 334 LKLAPEDIWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNAHPEL 393

Query: 365 AEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGKLTDCTVQDLNRTELFLVEGDSAGG 424
             QLAE+ I NA  R++A KKV RKKI  GPALPGKL DC  QD  R ELFLVEGDSAGG
Sbjct: 394 GMQLAELAINNAGRRLKAGKKVERKKITQGPALPGKLADCAGQDPMRAELFLVEGDSAGG 453

Query: 425 SAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLEALRYGK 484
           SAKQARD+EFQA+MPLRGKILNTWEV   +VLASQEVHDI+VA+G+DP + +L  LRYGK
Sbjct: 454 SAKQARDKEFQAIMPLRGKILNTWEVDGGEVLASQEVHDIAVAIGVDPGAADLGQLRYGK 513

Query: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
           +CILADADSDGLHIATLLCALF +HFR LV+AGHVYVAMPPLYRID GK++FYALD+ E+
Sbjct: 514 ICILADADSDGLHIATLLCALFVQHFRPLVEAGHVYVAMPPLYRIDLGKDIFYALDEAER 573

Query: 545 EGVLERL--SQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMD 602
           +G+LERL   +++ K  V RFKGLGEMNP QLRETTMDPNTRRLVQLT+DD E T E+MD
Sbjct: 574 DGILERLVAEKRRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDFEGTREIMD 633

Query: 603 MLLGKKRADDRRAWLQRNGDMAEV 626
           MLL KKRA DR++WL+  G++AEV
Sbjct: 634 MLLAKKRAGDRKSWLESKGNLAEV 657