Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., DNA topoisomerase IV, A subunit, proteobacterial from Pseudomonas stutzeri RCH2

 Score = 1046 bits (2704), Expect = 0.0
 Identities = 510/746 (68%), Positives = 625/746 (83%)

Query: 2   STEISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSA 61
           S ++S DGVE+  L  FTE AYLNYSMYVIMDRALP+IGDGLKPVQRRIIYAMSELGL+A
Sbjct: 4   SLDLSLDGVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLNA 63

Query: 62  SAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFA 121
            AK+KKSARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPKSFA
Sbjct: 64  DAKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFA 123

Query: 122 AMRYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGM 181
           AMRYTEA+LS+++E+LLSELGQGTV+W PNFDGT+ EP  LPARLP++LLNG TGIAVGM
Sbjct: 124 AMRYTEARLSRYSEVLLSELGQGTVEWVPNFDGTLDEPATLPARLPNLLLNGTTGIAVGM 183

Query: 182 ATDIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGR 241
           ATD+PPHN+REVA A + L+D P+A +  L ++V+GPDFPTEAEIITP  +L KIY +GR
Sbjct: 184 ATDVPPHNLREVAAACVRLLDEPSASVEQLCEHVRGPDFPTEAEIITPRADLLKIYETGR 243

Query: 242 GSIKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTR 301
           GS++MRAV+  E  DIV+TALPHQVSG+K+LEQIA QM+AKKLPMV DLRDESDHENP R
Sbjct: 244 GSVRMRAVYRVEDGDIVVTALPHQVSGSKVLEQIAGQMQAKKLPMVADLRDESDHENPCR 303

Query: 302 IVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRE 361
           IVI+PRSNRVD + LM HLFA+TDLE S+RVN N+IGLD RPQVK L  +LSEW+++R  
Sbjct: 304 IVIIPRSNRVDVEGLMQHLFATTDLESSYRVNANVIGLDGRPQVKNLRTLLSEWLTYRIG 363

Query: 362 TVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADA 421
           TVR RLQ+RLDKV  RLH+L+GLL+A+LNLDEVI IIR ED PK VLMARF+L+++QAD 
Sbjct: 364 TVRRRLQFRLDKVEKRLHLLEGLLVAFLNLDEVIHIIRTEDQPKPVLMARFELSELQADY 423

Query: 422 ILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDR 481
           ILDT+LR LA+LEEMKIRGEQDEL KER+KL  LLGSE +L  L++KE+ ADA+ +GD R
Sbjct: 424 ILDTRLRQLARLEEMKIRGEQDELAKEREKLLALLGSEAKLKKLVRKELLADAETYGDAR 483

Query: 482 RSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHAC 541
           RSP+VER EA+AL+E +L+PSE +TVV+SEKGW R AKGHD+D   L+YKAGD + T A 
Sbjct: 484 RSPIVERAEARALSENELLPSEPVTVVISEKGWARCAKGHDIDATGLSYKAGDGFKTAAA 543

Query: 542 GKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLV 601
           G+SNQ AVF+ S GRSYSL +H+LPSARGQGEP+TGRL    G +   V++ E+D L+++
Sbjct: 544 GRSNQYAVFIDSTGRSYSLAAHSLPSARGQGEPLTGRLAPPPGASFECVLLPEDDALYVI 603

Query: 602 GSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLF 661
            SDAGYGFV KG+DL +KN++GKAL++LP+ ++V+ P+ +A  D+D + A+T +GR+L+F
Sbjct: 604 ASDAGYGFVVKGEDLQAKNKAGKALLSLPKGAKVVAPRPLASRDDDWLAAVTTEGRLLVF 663

Query: 662 PIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLD 721
           P++DLPQL KGKGNKII IP  +  +REE L +L +LP GA++ L AGKR L LK  DL+
Sbjct: 664 PVRDLPQLGKGKGNKIIGIPGERVASREEYLIDLALLPAGATLVLQAGKRTLSLKAEDLE 723

Query: 722 NFRGERGRRGALLPRGLQRVTAIEIE 747
           +++GERGRRG  LPRG QRV  + +E
Sbjct: 724 HYKGERGRRGNKLPRGFQRVEGLLVE 749