Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., DNA gyrase subunit A from Synechococcus elongatus PCC 7942

 Score =  382 bits (981), Expect = e-110
 Identities = 244/626 (38%), Positives = 366/626 (58%), Gaps = 41/626 (6%)

Query: 12  QLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSART 71
           Q  LR     +YL Y+M VI+ RALP   DGLKPV RRI+YAM ELGL+    ++K AR 
Sbjct: 9   QTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMYELGLTPDRPFRKCARV 68

Query: 72  VGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPD-DPKSFAAMRYTEAKL 130
           VG+VLGKYHPHGD+A Y+A+V MAQ FS R PL+DG GN+G+ D DP   AAMRYTE++L
Sbjct: 69  VGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLIDGHGNFGSIDNDPP--AAMRYTESRL 126

Query: 131 SKF-AEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHN 189
                + LL ++   TVD+  NFDG+ QEP +LPARLP +LLNG +GIAVGMAT+IPPHN
Sbjct: 127 KPLTTDGLLQDIEAETVDFSDNFDGSQQEPTVLPARLPQLLLNGSSGIAVGMATNIPPHN 186

Query: 190 VREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAV 249
             E+    I LI NP     +LM+++ GPDFPT  +++  +  +   Y +G+GSI MR V
Sbjct: 187 PTELIAGVIALIHNPEISDRELMRHIPGPDFPTGGQVL-GSAGIRDAYLTGKGSITMRGV 245

Query: 250 WCKEGSD---------IVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPT 300
              +  +         I+IT LP+Q + A L+E+IA  +  K+L  + D+RDESD +   
Sbjct: 246 ATIDTIEAPGRPVRDAIIITELPYQTNKAALIERIAEMVNEKRLEGISDIRDESDRDG-M 304

Query: 301 RIVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRR 360
           RIVI  + +     +++N+L+  T L+ +F  N+  + +D  P +  L + L  ++ FR 
Sbjct: 305 RIVIELKRDAYP-QVVLNNLYKQTPLQSNFSANMLAL-VDGEPVLLTLKRSLEVFLDFRI 362

Query: 361 ETVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDD---PKAVLMARFDLTDI 417
           ET+  R +Y L K   R H+LQGLLIA  NLD +IE+IR   D    K  L+  + L+++
Sbjct: 363 ETIERRTRYELRKAEERDHLLQGLLIALGNLDAIIELIRRSADAPRAKQELIDVYGLSEV 422

Query: 418 QADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKF 477
           Q+DAIL  +LR L  LE  KI  E  +L++  +   ++L    R+  +++ E++    +F
Sbjct: 423 QSDAILQMQLRRLTALEAEKIEQEHQDLQRRIEDYRDILARRERVLEIIETELEQLQQRF 482

Query: 478 GDDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQS--LNYKAG-- 533
            + RR+ L+E +    L   DL+ +E   ++L+++G+I+    ++   QS     KAG  
Sbjct: 483 QEPRRTTLLEAD--GELETIDLIANEKSILLLTQQGYIKRMPVNEFTAQSRGTRGKAGAK 540

Query: 534 -------DNYLTHACGKSNQQAVFLGSDGRSYSLESHTLPSA--RGQGEPITGRLNVAEG 584
                  +++LT  C   N   +F    G  Y+L ++ +P+A    +G PI   L +   
Sbjct: 541 TKDDDSVEHFLT-CCDHDN--ILFFSDRGVVYNLPAYRIPAASRNARGVPIVQLLPIPRE 597

Query: 585 ---TTIRQVVMGEEDQLWLVGSDAGY 607
              T+I  V    +D+  ++ +  GY
Sbjct: 598 ERITSIVPVSAFSDDEYLVMLTQGGY 623