Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., DNA topoisomerase IV subunit A from Sinorhizobium meliloti 1021

 Score =  542 bits (1397), Expect = e-158
 Identities = 299/755 (39%), Positives = 459/755 (60%), Gaps = 37/755 (4%)

Query: 8   DGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKK 67
           D ++ + L+   E+ YL Y++  IM RALP + DGLKPV RRII+AMSE+GL  ++ +KK
Sbjct: 13  DNIQPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGLRPNSSFKK 72

Query: 68  SARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTE 127
            AR VGDV+GK+HPHGD + Y+A+V +AQ FS RYP+VDGQGN+G  D   + AA RYTE
Sbjct: 73  CARIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPVVDGQGNFGNIDGDNA-AAYRYTE 131

Query: 128 AKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPP 187
           AK+++ A +LL  + Q  VD++P ++   QEP +LP   P++L NG +GIAVGMAT IPP
Sbjct: 132 AKMTEVAALLLEGIDQDAVDFRPTYNEEDQEPTVLPGAFPNLLANGASGIAVGMATSIPP 191

Query: 188 HNVREVADATIHLIDNPNAPLTDLM--------QYVKGPDFPTEAEIITPTVELEKIYRS 239
           HN  E+ DA +HLI +P+A + DL+          ++GPDFPT   I+     + + YR+
Sbjct: 192 HNAHELCDAALHLIKHPDATVEDLLFDPANPQRGGIEGPDFPTGGVIVESRASMAESYRT 251

Query: 240 GRGSIKMRAVWCKE-----GSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDES 294
           GRG  ++RA W  E     G  IV+T +P+QV  ++L+E+IA  + A+KLP++ED+RDES
Sbjct: 252 GRGGFRVRARWAVEDLGRGGFQIVVTEIPYQVQKSRLIEKIAELLIARKLPLLEDIRDES 311

Query: 295 DHENPTRIVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSE 354
             +   R+V+VP+S  VD ++LM  LF  T+LE    +N+N++ +   P+V  L ++LSE
Sbjct: 312 AED--VRVVLVPKSRSVDANILMESLFKLTELESRIPLNMNVLSMGRVPRVMALNEVLSE 369

Query: 355 WISFRRETVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDL 414
           W++ RRE ++ R ++RL  +  RL IL G LIAYLN+DEVI IIR ED+PKAV++ RF L
Sbjct: 370 WLAHRREVLQRRSRHRLAAIDRRLEILGGYLIAYLNIDEVIRIIREEDEPKAVMIERFGL 429

Query: 415 TDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADA 474
           TD+QA+AIL+ +LR L KLEE +IR E D L KE+ ++E LL S  +    +  EI    
Sbjct: 430 TDVQAEAILNMRLRSLRKLEEFEIRTEFDSLSKEKAEIEALLASGDKQWQAVAWEIGEVK 489

Query: 475 DKFG-----DDRRSPLVEREEAKA-LTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSL 528
            KF        RRS   +  +A     ++ ++  E ITVV+SEKGWIR  KGH  D  SL
Sbjct: 490 KKFAKATELGKRRSTFSDAPDADVEAIQQAMIEKEPITVVISEKGWIRALKGHIADTSSL 549

Query: 529 NYKAGDNYLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIR 588
            +K GD        ++  + +   + G++Y+L    LP  RG GEP+   +++     + 
Sbjct: 550 QFKDGDGLKVSFPAQTTDKILIFTTGGKAYTLGGDKLPGGRGHGEPLRIMVDMENDQDVL 609

Query: 589 QVVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKALIN--LPENSEVMTPQVIADLDN 646
              + +  +  +V S AG GFV    D+++  R GK ++N  +P+ ++++ P     +  
Sbjct: 610 TAFVHDPARKLIVSSTAGNGFVVTESDIVANTRKGKQVMNVTMPDEAKLVVP-----VKG 664

Query: 647 DEILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITL 706
           D +  +    +ML+FP+  +P++++GKG ++        + ++  +S++        +T 
Sbjct: 665 DHLAVVGENRKMLVFPLVQVPEMARGKGVRL-------QRYKDGGVSDIRSFAIAEGLTW 717

Query: 707 YAGKRKLGLKVSD-LDNFRGERGRRGALLPRGLQR 740
                ++  K  D L  + G+R   G ++P+G  R
Sbjct: 718 EDSAGRVFTKTRDELIEWMGDRAGAGRVVPKGFPR 752