Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., DNA topoisomerase IV subunit A from Rahnella sp. WP5

 Score = 1085 bits (2806), Expect = 0.0
 Identities = 527/746 (70%), Positives = 640/746 (85%), Gaps = 1/746 (0%)

Query: 3   TEISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSAS 62
           +E++ DG E+L L  FTE+AYLNYSMYVIMDRALP+IGDGLKPVQRRIIYAMSELGLS +
Sbjct: 2   SEMTHDGTERLALHTFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIIYAMSELGLSNN 61

Query: 63  AKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAA 122
           AK+KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAA
Sbjct: 62  AKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAA 121

Query: 123 MRYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMA 182
           MRYTE++LSK+AE+LL ELGQGTVD+ PNFDGTMQEPKMLPARLP+ILLNG TGIAVGMA
Sbjct: 122 MRYTESRLSKYAEVLLRELGQGTVDYVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMA 181

Query: 183 TDIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRG 242
           TDIPPHN+REVA A + L++ PN+ L DL+++V+GPDFPTEAEIITP  E+ K+Y SG+G
Sbjct: 182 TDIPPHNIREVAAAAVALLEKPNSSLEDLLEFVQGPDFPTEAEIITPRNEIRKMYESGKG 241

Query: 243 SIKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRI 302
           S++MRAVW KE    VITALPHQVSGAK+LEQIA+QMRAKKLPMVEDLRDESDHENPTR+
Sbjct: 242 SVRMRAVWHKEDGSAVITALPHQVSGAKVLEQIASQMRAKKLPMVEDLRDESDHENPTRL 301

Query: 303 VIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRET 362
           V+VPRSNR+D D +MNHLFA+TDLE+S+R+N+NMIGLD+RPQVKGL++IL+EW+++RR+T
Sbjct: 302 VVVPRSNRIDLDQVMNHLFATTDLERSYRINMNMIGLDHRPQVKGLLEILTEWLAYRRDT 361

Query: 363 VRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAI 422
           VR RL +RLDKVL RLHIL+GLL A+LN+DEVI IIR ED+PK VLM RF+L+D QA+AI
Sbjct: 362 VRRRLNFRLDKVLKRLHILEGLLTAFLNIDEVIHIIRTEDEPKPVLMQRFELSDTQAEAI 421

Query: 423 LDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRR 482
           L+ KLRHLAKLEE KIRGEQDEL KER +L+ LL SER+L+ L++KEI+ADA+ FGD+RR
Sbjct: 422 LELKLRHLAKLEETKIRGEQDELAKERDQLQALLASERKLSTLIRKEIQADAEAFGDERR 481

Query: 483 SPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACG 542
           SP+ EREEA+A++E D +PSE +T+VLSE GW+R AKGHD+D   L+YKAGD++   A G
Sbjct: 482 SPITEREEARAMSEHDFIPSEPVTIVLSESGWVRSAKGHDIDASGLSYKAGDSFRAAAKG 541

Query: 543 KSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVG 602
           KSNQ  VF+ S GRSY+L+  TLPSARGQGEP+TG+L    G TI  V+M  +DQ  L+ 
Sbjct: 542 KSNQPVVFMDSTGRSYALDPTTLPSARGQGEPLTGKLTPPPGATIEHVLMAADDQKLLMA 601

Query: 603 SDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFP 662
           SDAGYGFVC  +DL+++NR+GKA+I LP+N++  TP  +   D D +L+IT  GRMLLFP
Sbjct: 602 SDAGYGFVCTFNDLVARNRAGKAMITLPDNAKAFTPMELHGSD-DMLLSITAAGRMLLFP 660

Query: 663 IKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDN 722
           + DLPQLSKGKGNKI++IPAA+A + E+ L+ L+VLP   SITL+ GKRKL L+  DL  
Sbjct: 661 VADLPQLSKGKGNKIVSIPAAQAASGEDKLAWLLVLPPQTSITLHVGKRKLVLRPEDLQK 720

Query: 723 FRGERGRRGALLPRGLQRVTAIEIET 748
           FR ERGR+G LLPRGLQR+  +E+++
Sbjct: 721 FRAERGRKGTLLPRGLQRIDRVEVDS 746