Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 782 a.a., DNA topoisomerase 4 subunit A from Phaeobacter inhibens DSM 17395

 Score =  507 bits (1305), Expect = e-147
 Identities = 293/767 (38%), Positives = 453/767 (59%), Gaps = 51/767 (6%)

Query: 14  PLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSARTVG 73
           PLR+   + YL Y++  IM RALP   DGLKPV RRI+YAMS L L+++  + KSA+  G
Sbjct: 22  PLRRAIGERYLTYALSTIMHRALPDARDGLKPVHRRILYAMSRLRLTSTGGFLKSAKISG 81

Query: 74  DVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKF 133
           D +G +HPHGD+A Y+AM  +AQ F+ RYPLVDGQGN+G  D     AA RYTEA+++  
Sbjct: 82  DTMGDFHPHGDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNP-AASRYTEARMTFV 140

Query: 134 AEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNVREV 193
           AE +L  L +  VD++ N+DG + EP +LPA  P+IL NG  GIAVGMAT+IPPHN+ E+
Sbjct: 141 AEAMLEGLSENAVDFRDNYDGRLTEPAVLPATFPNILANGAAGIAVGMATNIPPHNIGEL 200

Query: 194 ADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAVWCKE 253
            DA +HLI  P+A    L+ YV GPDFPT   I+ P   + K Y +GRGS ++R     E
Sbjct: 201 IDACLHLIKTPDARDDTLLNYVPGPDFPTGGIIVEPKENIAKAYNTGRGSFRLRCTHEVE 260

Query: 254 GS-----DIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIVPRS 308
                   IVIT +P+QV  +KL+E+IA  ++ KK+P++ D+RDES  +   RIV+ P+S
Sbjct: 261 DLGRGQWQIVITEIPYQVQKSKLIEKIAELIQTKKIPILADVRDESAED--IRIVLEPKS 318

Query: 309 NRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRSRLQ 368
             VD ++LMN +F ++DLE  F +N+N++     P+V  + ++L  ++  RR+ ++ R Q
Sbjct: 319 KNVDPEVLMNMMFRNSDLEIRFSLNMNVLIDGVTPKVCSMKEVLRAFLDHRRDVLQRRSQ 378

Query: 369 YRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLM------------------- 409
           +R+DK+  RL +L+G +IA+LNLD VI+IIR +DDPKA LM                   
Sbjct: 379 HRMDKIDHRLEVLEGFIIAFLNLDRVIDIIRYDDDPKAALMRENWSLDHPRAYTEADYVS 438

Query: 410 ---ARFDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLL 466
                 +LT++QA+AIL+ +LR L +LEE+++  E+D L +ER  L ELL SE    + +
Sbjct: 439 PAIGAGELTEVQAEAILNMRLRSLRRLEEIELVRERDALREERAGLVELLASEDLQWSRI 498

Query: 467 KKEIKADADKF-----GDDRRSPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGH 521
            +++K    +F     G  RR+   E  E + +    ++  E ITVV S+ GWIR   GH
Sbjct: 499 AEQLKDTKKQFGKTYEGGPRRTRFAEAGEVEEVPLEAMIDREPITVVCSQMGWIRAMTGH 558

Query: 522 DVDCQSLNYKAGD--NYLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRL 579
               + L +K GD   ++ HA  ++  + +   S+GR Y++ +  LP  RG GEP+   +
Sbjct: 559 IDLGRELKFKDGDGPRFIFHA--ETTDRLLVFASNGRFYTISASNLPGGRGMGEPLRLMV 616

Query: 580 NVAEGTTIRQVVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQ 639
           ++     I  +++   +   LV SDAG GF+C   D++++ RSGK ++N+ ++      +
Sbjct: 617 DLPNEVEIVDILIHNPEGRLLVASDAGNGFICAEKDIVAQTRSGKQVLNVKDDDRA---K 673

Query: 640 VIADLDNDEILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAK----TREEVLSNL 695
           +   +  D +  ++  G+ L+F ++++P+L++GKG ++     A+ K      +  LS++
Sbjct: 674 ICIRVTGDHVAVVSENGKFLVFAVEEMPELTRGKGVRLQKYNMARGKQGSLELDGGLSDV 733

Query: 696 MVL--PQGASITLYAGKRKLGLKVSDLDNFRGERGRRGALLPRGLQR 740
                  G S  +  GK +     +DL  + G+R   G   P G  R
Sbjct: 734 TTFNWDDGISWEMGGGKTR---HETDLGQWLGKRAGIGKRPPYGFPR 777