Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., DNA topoisomerase IV subunit A (RefSeq) from Shewanella loihica PV-4

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 520/743 (69%), Positives = 638/743 (85%)

Query: 4   EISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASA 63
           ++S DGVEQ+PLR+FTE+AYLNYSMYVIMDRALP+IGDGLKPVQRRI+YAMSELGLSA +
Sbjct: 6   DLSLDGVEQMPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLSAQS 65

Query: 64  KYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM 123
           K+KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM
Sbjct: 66  KHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM 125

Query: 124 RYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMAT 183
           RYTEA+LSKF+E+LL+ELGQGTVDW  NFDGT++EP +LPARLPHILLNG+TGIAVGMAT
Sbjct: 126 RYTEARLSKFSEVLLTELGQGTVDWGVNFDGTLKEPMVLPARLPHILLNGITGIAVGMAT 185

Query: 184 DIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGS 243
           D+PPHN RE+ DA + LIDNP   L  LM+ V GPD+PTEAEII+P  E+ KIY +GRGS
Sbjct: 186 DVPPHNARELVDACVELIDNPKVDLERLMELVPGPDYPTEAEIISPRTEIAKIYETGRGS 245

Query: 244 IKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIV 303
           IK RAV+  E  +IVITALPHQ SG K+LEQIAAQM+AKKLPMV DLRDESDHE+P RIV
Sbjct: 246 IKARAVYSVESGEIVITALPHQASGGKILEQIAAQMQAKKLPMVADLRDESDHESPVRIV 305

Query: 304 IVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETV 363
           IVPRSNRVDCD LM HLFA+TDLEK+FRVNLN++GL+ RPQVKGL Q+L+EW+ FR  TV
Sbjct: 306 IVPRSNRVDCDQLMAHLFATTDLEKNFRVNLNVLGLNGRPQVKGLKQLLTEWLEFRLTTV 365

Query: 364 RSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAIL 423
           R RL++RLDKVLARLHIL+ L+IA+LN+DEVIEIIR  DDPKA LM+RF+LTD QA+AIL
Sbjct: 366 RRRLEHRLDKVLARLHILEALMIAFLNIDEVIEIIRYHDDPKAELMSRFNLTDEQANAIL 425

Query: 424 DTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRRS 483
           D KLRHLAKLEE KI+ EQ ELE ER+KLE LL S+RR+  L+KKE+K DA+ +GD+RRS
Sbjct: 426 DLKLRHLAKLEEFKIKTEQSELEAEREKLELLLSSDRRMKTLIKKELKQDAETYGDERRS 485

Query: 484 PLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACGK 543
           PLVER E++AL+E++L+P+EA+TVVLSEKGW+R AKGHD+D  +L+YKAGD +L  A G+
Sbjct: 486 PLVERSESRALSEQELVPAEAVTVVLSEKGWVRCAKGHDIDPTALSYKAGDGFLCAASGR 545

Query: 544 SNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVGS 603
           SN   VF+GS GR+++ ++HTLPSAR QGEP+T R  ++ G ++   ++GE+ Q +L+ S
Sbjct: 546 SNHATVFIGSTGRAFATDTHTLPSARSQGEPVTTRFQLSPGESMAHALLGEDGQCFLLAS 605

Query: 604 DAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPI 663
           DAGYGF+    D++S+N++GKAL++LP N++V+ P+ +    ++ ILAITN+GRMLLF +
Sbjct: 606 DAGYGFIGDYKDMVSRNKAGKALLSLPANAQVLPPKRVDKSRSESILAITNEGRMLLFSV 665

Query: 664 KDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNF 723
             LPQL+KGKGNKII I + +AK+REE+L +L V+PQ  ++TL+AGKRKL LK SDL+++
Sbjct: 666 DALPQLAKGKGNKIIGIASDRAKSREELLVHLHVVPQDTAVTLWAGKRKLTLKPSDLEHY 725

Query: 724 RGERGRRGALLPRGLQRVTAIEI 746
           RGERGRRGA LPRGLQRV  +E+
Sbjct: 726 RGERGRRGAKLPRGLQRVDKVEL 748