Pairwise Alignments

Query, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., DNA gyrase, A subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  398 bits (1022), Expect = e-115
 Identities = 248/671 (36%), Positives = 393/671 (58%), Gaps = 30/671 (4%)

Query: 11  EQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKKSAR 70
           +Q+ + K    +YL YS+ VI+ RA+P + DGLKPV RRI++A  ELG + +  +KKSAR
Sbjct: 24  QQISIEKELRKSYLEYSLSVIIGRAIPDVRDGLKPVHRRIMFAQHELGNAYNRPHKKSAR 83

Query: 71  TVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKL 130
            VGDV+GKYHPHGDSA Y+A+V MAQ FS R PLVDGQGN+G+ D   + AAMRYTE ++
Sbjct: 84  IVGDVIGKYHPHGDSAVYDAIVRMAQEFSMRDPLVDGQGNFGSIDGDAA-AAMRYTEVRM 142

Query: 131 SKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNV 190
           S+ A   ++++ + TVD++PN+D T+ EP +LP R+P++LLNG TGIAVGMAT+IPPHN+
Sbjct: 143 SRLAGEFIADIEKETVDFRPNYDNTLLEPVVLPTRVPNLLLNGSTGIAVGMATNIPPHNL 202

Query: 191 REVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRA-V 249
            E+ +A +HL+D+    + DLM +VKGPDFPT    +     L   Y +GRG++K+R  V
Sbjct: 203 GELCNALLHLLDDDACTIDDLMDHVKGPDFPT-GGFVYAGQGLVDAYTTGRGTVKVRGKV 261

Query: 250 WCKEGSD----IVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIVIV 305
             +E       IVI  +P+ ++ + L+E+IAA +  +++  V DLRDESD +   R+VI 
Sbjct: 262 EIEERKKGFQAIVIREIPYGLNKSSLVEKIAALVNERRIDGVADLRDESDRKG-IRVVID 320

Query: 306 PRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETVRS 365
            +   +  D+++N L+  T LE S+ +N+  + +DNRPQ+  L   LS ++  RRE +  
Sbjct: 321 LKRGTIP-DIVVNALYKYTPLESSYGINMLAV-VDNRPQLLDLKSALSHFLEHRREIIIR 378

Query: 366 RLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDP---KAVLMARFDLTDIQADAI 422
           R +Y L K  AR HIL+GL IA  N+DEV+ +IR    P   K  LM RF L++ Q+ AI
Sbjct: 379 RTRYDLRKAEARAHILEGLRIALDNIDEVVALIRASATPQEAKDRLMQRFGLSEAQSQAI 438

Query: 423 LDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRR 482
           LD +L+ L  LE  K+  E  EL K+ +    +L +   L  ++++E     D +   RR
Sbjct: 439 LDMRLQRLTNLEHEKLLDEYRELLKKIEYFRSILENIEVLRQVMREEFTEIRDTYATKRR 498

Query: 483 SPLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYK-------AGDN 535
           + ++  +E + +   DL+P + + + LS +G+I+     +   Q    K       + D+
Sbjct: 499 TEVL-MDELEGIAIEDLIPDDDVVITLSRRGYIKRTTLDNYQQQRRGGKGIAGLHTSDDD 557

Query: 536 YLTHACGKSNQQAVFLGSD-GRSYSLESHTLP--SARGQGEPITGRLNVAEG---TTIRQ 589
           ++      +N Q + L ++ G+ + L+ H +   S   +G  I   L + +    TT+  
Sbjct: 558 FVQEFLTTTNHQYLLLFTNHGKMHQLKVHQVAEGSRTAKGVHIANLLPLEKDEWVTTVLS 617

Query: 590 VVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEI 649
           V    ED+ +L  +  G              + G   + L ++ E++   ++ ++ ND+ 
Sbjct: 618 VREFAEDRFFLFVTKRGMVKRSSASLYARARKGGLIAVGLRDDDELI---MVREIHNDDH 674

Query: 650 LAITNQGRMLL 660
           + +T  G M +
Sbjct: 675 VVLTTGGGMAI 685