Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A from Synechococcus elongatus PCC 7942

 Score =  150 bits (379), Expect = 3e-41
 Identities = 102/281 (36%), Positives = 146/281 (51%), Gaps = 33/281 (11%)

Query: 10  LFPVLATLF----GLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKLTLSL 65
           +F  +A LF    G  +GSFLNVVIYRLP                          L+L  
Sbjct: 1   MFEAVALLFVAVLGAAIGSFLNVVIYRLPL------------------------GLSLLH 36

Query: 66  PRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIATHFP 125
           P S CP+C+  +R  DN+P++ WL LRG+C  C+  I ARYP++E LTA + +++A  F 
Sbjct: 37  PPSRCPYCRRSLRPQDNLPVVGWLKLRGRCHFCQHRIPARYPIVEALTAALFVLLAVQFG 96

Query: 126 FGVFAV-ALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIALALL---GFSPVSLSDA 181
           +    +   +FFS+ L+A + ID DT+ LP+ LT   L  G+A  L       PV+L  +
Sbjct: 97  WSAATLGGWIFFSW-LLALSVIDLDTMTLPNVLTASGLAVGVAFQLAIAPATWPVTLFWS 155

Query: 182 VIGAMAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPVIVLLSSVVGVI 241
           +  A+A         WL +    +  +G GD KLLA LG WLG  +L + + L+ + G I
Sbjct: 156 LFVAIAALWLSDLFRWLGEFALRQPVLGGGDSKLLALLGVWLGGPKLLLALFLACLSGAI 215

Query: 242 FGLIQLRQQKKGIDMAFPFGPYLAIAGWFALLWGDKVIDWY 282
            G I   +       A PFGP+LA+ G  A +WG + ID Y
Sbjct: 216 AGGIGRWRGTLKPMQAMPFGPFLALGGAIAWIWGAEWIDLY 256