Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., prepilin peptidase (RefSeq) from Shewanella loihica PV-4

 Score =  301 bits (771), Expect = 1e-86
 Identities = 150/300 (50%), Positives = 203/300 (67%), Gaps = 17/300 (5%)

Query: 1   MELFYFYPWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYG---ITPP 57
           ++L   YP LF  ++ +F  ++GSFLNVVI+RLP +M+REW+ EC     EY    +T  
Sbjct: 5   IQLMAQYPLLFAAISFVFAAVIGSFLNVVIHRLPVMMKREWQEECNQYLDEYHKATVTEI 64

Query: 58  EGKLT-----------LSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARY 106
           + KL            L +P S+CP C+T I+   N+P++ WL L G+C+HCK  IS RY
Sbjct: 65  KDKLAQPIDDFPEKYNLIVPGSSCPKCKTDIKPWHNLPVIGWLMLGGKCAHCKTSISVRY 124

Query: 107 PLIELLTALMSLVIATHF-PFGVFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGG 165
           P+IE LT      +A HF P   F  A L  ++ LIA T ID D +LLPDQ+TLPLLW G
Sbjct: 125 PIIEALTGFAVAYLAYHFGPTWQFVFATLL-TFGLIALTGIDLDEMLLPDQITLPLLWLG 183

Query: 166 IALALLGFSPVSLSDAVIGAMAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGW 225
           + + L G + VS++DAVIGA AGY+SLWS++W FK+LTGKEGMGYGDFKLLA  GAW GW
Sbjct: 184 LLINLNG-TYVSITDAVIGASAGYMSLWSVFWGFKILTGKEGMGYGDFKLLAVFGAWFGW 242

Query: 226 QQLPVIVLLSSVVGVIFGLIQLRQQKKGIDMAFPFGPYLAIAGWFALLWGDKVIDWYFTT 285
           Q LP+I+LLSS+VG + GL+ +  +K       PFGPY+A+AGW A++WG+ +++WY +T
Sbjct: 243 QLLPLIILLSSIVGALVGLLLIVNKKINSGNPIPFGPYIALAGWIAMIWGENIVNWYLST 302