Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., type IV pilus prepilin peptidase PilD from Marinobacter adhaerens HP15

 Score =  280 bits (717), Expect = 2e-80
 Identities = 145/278 (52%), Positives = 185/278 (66%), Gaps = 5/278 (1%)

Query: 8   PWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAA--SFPEYGITPPEGKLTLSL 65
           PWL  +   L  L VGSFLNVVI RLPK+M ++WR +C      PE      E ++TL+ 
Sbjct: 11  PWLLYLSVILVSLCVGSFLNVVILRLPKMMHQDWRCQCEEFLELPEKQ-RKEEERITLAK 69

Query: 66  PRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIATHFP 125
           P STCP C   IR  +NIP+LSWL LRG+C+ CKAPIS RYP+IE +TA+ S+V      
Sbjct: 70  PASTCPSCGHGIRAWENIPVLSWLVLRGKCASCKAPISPRYPIIEAVTAIFSVVTIAVIG 129

Query: 126 FGVFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIALALLGFSPVSLSDAVIGA 185
               A+  L   + L+A T IDFDT LLPD +TLPL+W G+ L   G      + A  GA
Sbjct: 130 PNESALWALLLVWALVALTVIDFDTQLLPDSITLPLMWLGLVLNYFGVL-TDFNSAFWGA 188

Query: 186 MAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPVIVLLSSVVGVIFGLI 245
           + GYL+LWS+YWLFKL+TGKEGMG+GDFKLLAALGAWLGWQ LP ++LLSSVVG + G+ 
Sbjct: 189 VVGYLALWSVYWLFKLVTGKEGMGHGDFKLLAALGAWLGWQLLPAVILLSSVVGAVVGIG 248

Query: 246 QLRQQKKGIDMAFPFGPYLAIAGWFALLWGDKV-IDWY 282
            +  ++ G ++  PFGPYLA AG   L +G ++   WY
Sbjct: 249 LMVFKQHGREVPIPFGPYLATAGLLCLWFGTEIQAFWY 286