Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., type IV prepilin-like proteins leader peptidase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  160 bits (404), Expect = 4e-44
 Identities = 96/293 (32%), Positives = 148/293 (50%), Gaps = 42/293 (14%)

Query: 8   PWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEYGITPPEGKLTLSLPR 67
           P L P  A +FGL+ GSF NV I+R        W                        P 
Sbjct: 6   PELLPWFALVFGLVFGSFYNVCIHRYIAGESIVW------------------------PP 41

Query: 68  STCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIELLTALMSLVIATHF--- 124
           S CP C+T + + D +P+ S+L LRG+C HC + IS RYP++EL + L++ ++   +   
Sbjct: 42  SRCPKCETRLGIPDLVPVFSYLFLRGKCRHCGSHISVRYPVVELASGLLAFLLMHRYGLT 101

Query: 125 -PFGVFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIAL---ALLGFSPVSLSD 180
            PF V+ V    F   L+ A+FIDF+  +LPD +TL    GG  L   A +    +    
Sbjct: 102 WPFAVYYV----FGSALLVASFIDFELFILPDPITL----GGAVLAPPAAILLLDLPWQA 153

Query: 181 AVIGAMAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPVIVLLSSVVGV 240
           ++ GA+ G    W + WLF+ L G EGMG GD KL+  +G   G   LP++ +++    +
Sbjct: 154 SLAGAVVGGGGFWLVAWLFRKLRGVEGMGLGDVKLMLLIGGLCGASALPLVTIIAGCAAL 213

Query: 241 IFGLIQLRQQKKGID---MAFPFGPYLAIAGWFALLWGDKVIDWYFTTWVGQP 290
              L  L +++KG D   +  PFGP+L++     +L+G  +I W+     G+P
Sbjct: 214 GASLWFLARREKGTDAREVQIPFGPFLSLGAVMHMLYGPDIIHWWIALVTGRP 266