Pairwise Alignments

Query, 291 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) from Shewanella sp. ANA-3

 Score =  301 bits (770), Expect = 2e-86
 Identities = 153/295 (51%), Positives = 199/295 (67%), Gaps = 20/295 (6%)

Query: 8   PWLFPVLATLFGLIVGSFLNVVIYRLPKIMEREWRAECAASFPEY--------GI----- 54
           PWLF  L+ +F   +GSFLNVVI+R P +M+REW+ EC     EY        GI     
Sbjct: 17  PWLFITLSFVFAATIGSFLNVVIHRFPVMMKREWQQECNQYLQEYHADVVEQIGIEKLNK 76

Query: 55  ---TPPEGKLTLSLPRSTCPHCQTPIRVIDNIPLLSWLALRGQCSHCKAPISARYPLIEL 111
              T PE K  L +P S CP C+T I+   N+P++ WL LRG+C+ C   IS+RYP+IEL
Sbjct: 77  PIDTYPE-KYNLVVPGSACPKCKTAIKPWHNLPIVGWLMLRGKCAACNTAISSRYPIIEL 135

Query: 112 LTALMSLVIATHF-PFGVFAVALLFFSYVLIAATFIDFDTLLLPDQLTLPLLWGGIALAL 170
           +T L+   +A HF P   F  A +  ++VLIA T ID D +LLPDQ+TLPLLW G+ L  
Sbjct: 136 VTGLLVATLAWHFGPSWQFVFAAVL-TFVLIALTGIDLDEMLLPDQMTLPLLWLGL-LIN 193

Query: 171 LGFSPVSLSDAVIGAMAGYLSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQQLPV 230
           L  +  + +DAVIGA AGYLSLWS++WLFKLLTGKEGMGYGDFKLLA  GAWLGWQ LP+
Sbjct: 194 LNHTFTTPTDAVIGAAAGYLSLWSVFWLFKLLTGKEGMGYGDFKLLAVFGAWLGWQMLPL 253

Query: 231 IVLLSSVVGVIFGLIQLRQQKKGIDMAFPFGPYLAIAGWFALLWGDKVIDWYFTT 285
           ++LLSS+VG + G+  +  ++  +    PFGPY+A AGW AL+WG  ++DWY +T
Sbjct: 254 VILLSSLVGALVGITLIVLKRNQLANPIPFGPYIAAAGWIALIWGQPIVDWYLST 308