Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Type II secretory pathway, component PulF from Pseudomonas stutzeri RCH2

 Score =  332 bits (850), Expect = 2e-95
 Identities = 169/405 (41%), Positives = 260/405 (64%), Gaps = 1/405 (0%)

Query: 3   ATQTLPLKNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLT 62
           A + +    + W+G N  G K+ G++  +S   V+ +L+ Q +  +K++K SVSL     
Sbjct: 2   AQKAIKTSVFTWEGTNRQGAKIKGELSGVSPALVKAQLRKQGVNPQKVRKKSVSLFGA-G 60

Query: 63  HRVKSKDITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSK 122
            ++K  DI + TRQ+ATM+  GVP++Q+  ++G+      M+ ++  + + V AG   + 
Sbjct: 61  KKIKPMDIALFTRQMATMMKAGVPLLQSFDIIGEGFDNPNMRKLVDDLKQEVAAGNSFAT 120

Query: 123 AMRTASAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLV 182
           A+R    +FD LY +LV++GE SG+L  + +R+ATY+EK+E L+AK+ KA+ YP  VVLV
Sbjct: 121 ALRKKPQYFDDLYCNLVDSGEQSGSLETLLDRVATYKEKTEALKAKIKKAMNYPIAVVLV 180

Query: 183 ALGVSYLMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLK 242
           A+ VS ++L  V+P+F+ +F  FGAELP FT  V+ LS  +QA+       +    +  K
Sbjct: 181 AIIVSAILLIKVVPQFQDVFANFGAELPAFTLMVIGLSEALQAWWHVVLFVMFGVAYAFK 240

Query: 243 ALRKNSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTS 302
                S + R    R  L+ P++G++L K+++A+F+RTLAT+FAAG+P++ +L + A  +
Sbjct: 241 TAHGKSERFRNGFDRFLLRIPVVGDILYKSAVARFARTLATTFAAGVPLVDALDSVAGAT 300

Query: 303 GNVHFETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIY 362
           GNV F  A  +V  D ++GM +  +MR T  FP M +QM  IGEESG LD+ML KVAT Y
Sbjct: 301 GNVVFRNATMKVKSDVSSGMQLNFSMRTTGTFPTMAVQMTAIGEESGALDEMLGKVATFY 360

Query: 363 EFEVDNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
           E EVDN VD L  ++EP+I+  LG +VGGL++AMYLPIF L SV+
Sbjct: 361 EDEVDNMVDGLTSLMEPMIMAVLGVLVGGLIIAMYLPIFQLGSVV 405